Gene : Cagra.19052s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11467:SF50 - HISTONE H1 Genomic Order:  1
Name:  ? Cagra.19052s0001 Secondary Identifier:  ? PAC:28910653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.19052s0001 0.5kb upstream 0.5kb upstream 1282 true Scaffold19052: 5901-7182 Capsella grandiflora
Cagra.19052s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold19052: 6683-7182 Capsella grandiflora
Cagra.19052s0001 0.5kb downstream 0.5kb downstream 1282 true Scaffold19052: 5401-6682 Capsella grandiflora
Cagra.19052s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold19052: 5401-5900 Capsella grandiflora
Cagra.19052s0001 1.0kb upstream 1.0kb upstream 1680 true Scaffold19052: 5901-7580 Capsella grandiflora
Cagra.19052s0001 1.0kb upstream 1.0kb upstream 898 false Scaffold19052: 6683-7580 Capsella grandiflora
Cagra.19052s0001 1.0kb downstream 1.0kb downstream 1782 true Scaffold19052: 4901-6682 Capsella grandiflora
Cagra.19052s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold19052: 4901-5900 Capsella grandiflora
Cagra.19052s0001 2.0kb upstream 2.0kb upstream 1680 true Scaffold19052: 5901-7580 Capsella grandiflora
Cagra.19052s0001 2.0kb upstream 2.0kb upstream 898 false Scaffold19052: 6683-7580 Capsella grandiflora
Cagra.19052s0001 2.0kb downstream 2.0kb downstream 2782 true Scaffold19052: 3901-6682 Capsella grandiflora
Cagra.19052s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold19052: 3901-5900 Capsella grandiflora
Cagra.19052s0001 5.0kb upstream 5.0kb upstream 1680 true Scaffold19052: 5901-7580 Capsella grandiflora
Cagra.19052s0001 5.0kb upstream 5.0kb upstream 898 false Scaffold19052: 6683-7580 Capsella grandiflora
Cagra.19052s0001 5.0kb downstream 5.0kb downstream 5782 true Scaffold19052: 901-6682 Capsella grandiflora
Cagra.19052s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold19052: 901-5900 Capsella grandiflora
Cagra.19052s0001 10.0kb upstream 10.0kb upstream 1680 true Scaffold19052: 5901-7580 Capsella grandiflora
Cagra.19052s0001 10.0kb upstream 10.0kb upstream 898 false Scaffold19052: 6683-7580 Capsella grandiflora
Cagra.19052s0001 10.0kb downstream 10.0kb downstream 6682 true Scaffold19052: 1-6682 Capsella grandiflora
Cagra.19052s0001 10.0kb downstream 10.0kb downstream 5900 false Scaffold19052: 1-5900 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361543 5261 Brassicaceae View MSA
123830192 5264 Brassicales-Malvales View MSA
124341571 5266 SBM View MSA
124245931 5268 Malvidae View MSA
124061860 5270 Rosid View MSA
123748921 5271 Pentapetalae View MSA
122797183 5272 Eudicot View MSA
122049683 5273 Angiosperm View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain