Gene : Cagra.19062s0004 C. grandiflora v1.1
Defline:  (1 of 168) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  4
Name:  ? Cagra.19062s0004 Secondary Identifier:  ? PAC:28906146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.19062s0004 0.5kb upstream 0.5kb upstream 5832 true Scaffold19062: 15092-20923 Capsella grandiflora
Cagra.19062s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold19062: 15092-15591 Capsella grandiflora
Cagra.19062s0004 0.5kb downstream 0.5kb downstream 5832 true Scaffold19062: 15592-21423 Capsella grandiflora
Cagra.19062s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold19062: 20924-21423 Capsella grandiflora
Cagra.19062s0004 1.0kb upstream 1.0kb upstream 6332 true Scaffold19062: 14592-20923 Capsella grandiflora
Cagra.19062s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold19062: 14592-15591 Capsella grandiflora
Cagra.19062s0004 1.0kb downstream 1.0kb downstream 6332 true Scaffold19062: 15592-21923 Capsella grandiflora
Cagra.19062s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold19062: 20924-21923 Capsella grandiflora
Cagra.19062s0004 2.0kb upstream 2.0kb upstream 7332 true Scaffold19062: 13592-20923 Capsella grandiflora
Cagra.19062s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold19062: 13592-15591 Capsella grandiflora
Cagra.19062s0004 2.0kb downstream 2.0kb downstream 7332 true Scaffold19062: 15592-22923 Capsella grandiflora
Cagra.19062s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold19062: 20924-22923 Capsella grandiflora
Cagra.19062s0004 5.0kb upstream 5.0kb upstream 10332 true Scaffold19062: 10592-20923 Capsella grandiflora
Cagra.19062s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold19062: 10592-15591 Capsella grandiflora
Cagra.19062s0004 5.0kb downstream 5.0kb downstream 10332 true Scaffold19062: 15592-25923 Capsella grandiflora
Cagra.19062s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold19062: 20924-25923 Capsella grandiflora
Cagra.19062s0004 10.0kb upstream 10.0kb upstream 15332 true Scaffold19062: 5592-20923 Capsella grandiflora
Cagra.19062s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold19062: 5592-15591 Capsella grandiflora
Cagra.19062s0004 10.0kb downstream 10.0kb downstream 13610 true Scaffold19062: 15592-29201 Capsella grandiflora
Cagra.19062s0004 10.0kb downstream 10.0kb downstream 8278 false Scaffold19062: 20924-29201 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363254 5261 Brassicaceae View MSA
123836136 5264 Brassicales-Malvales View MSA
124322135 5266 SBM View MSA
124239590 5268 Malvidae View MSA
124071393 5270 Rosid View MSA
123738469 5271 Pentapetalae View MSA
122788721 5272 Eudicot View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain