Gene : Cagra.11000s0004 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11730:SF39 - AMMONIUM TRANSPORTER 1 MEMBER 2 Genomic Order:  4
Name:  ? Cagra.11000s0004 Secondary Identifier:  ? PAC:28909758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11000s0004 0.5kb upstream 0.5kb upstream 2350 true Scaffold11000: 30217-32566 Capsella grandiflora
Cagra.11000s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold11000: 30217-30716 Capsella grandiflora
Cagra.11000s0004 0.5kb downstream 0.5kb downstream 2350 true Scaffold11000: 30717-33066 Capsella grandiflora
Cagra.11000s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold11000: 32567-33066 Capsella grandiflora
Cagra.11000s0004 1.0kb upstream 1.0kb upstream 2850 true Scaffold11000: 29717-32566 Capsella grandiflora
Cagra.11000s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold11000: 29717-30716 Capsella grandiflora
Cagra.11000s0004 1.0kb downstream 1.0kb downstream 2850 true Scaffold11000: 30717-33566 Capsella grandiflora
Cagra.11000s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold11000: 32567-33566 Capsella grandiflora
Cagra.11000s0004 2.0kb upstream 2.0kb upstream 3850 true Scaffold11000: 28717-32566 Capsella grandiflora
Cagra.11000s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold11000: 28717-30716 Capsella grandiflora
Cagra.11000s0004 2.0kb downstream 2.0kb downstream 3850 true Scaffold11000: 30717-34566 Capsella grandiflora
Cagra.11000s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold11000: 32567-34566 Capsella grandiflora
Cagra.11000s0004 5.0kb upstream 5.0kb upstream 6850 true Scaffold11000: 25717-32566 Capsella grandiflora
Cagra.11000s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold11000: 25717-30716 Capsella grandiflora
Cagra.11000s0004 5.0kb downstream 5.0kb downstream 6833 true Scaffold11000: 30717-37549 Capsella grandiflora
Cagra.11000s0004 5.0kb downstream 5.0kb downstream 4983 false Scaffold11000: 32567-37549 Capsella grandiflora
Cagra.11000s0004 10.0kb upstream 10.0kb upstream 11850 true Scaffold11000: 20717-32566 Capsella grandiflora
Cagra.11000s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold11000: 20717-30716 Capsella grandiflora
Cagra.11000s0004 10.0kb downstream 10.0kb downstream 6833 true Scaffold11000: 30717-37549 Capsella grandiflora
Cagra.11000s0004 10.0kb downstream 10.0kb downstream 4983 false Scaffold11000: 32567-37549 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371625 5261 Brassicaceae View MSA
123839167 5264 Brassicales-Malvales View MSA
124343313 5266 SBM View MSA
124248749 5268 Malvidae View MSA
124067931 5270 Rosid View MSA
123740336 5271 Pentapetalae View MSA
122796645 5272 Eudicot View MSA
122042799 5273 Angiosperm View MSA
121344623 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain