Gene : Cagra.1105s0002 C. grandiflora v1.1
Defline:  (1 of 23) PF00627 - UBA/TS-N domain Genomic Order:  2
Name:  ? Cagra.1105s0002 Secondary Identifier:  ? PAC:28911164
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1105s0002 0.5kb upstream 0.5kb upstream 2426 true Scaffold1105: 7025-9450 Capsella grandiflora
Cagra.1105s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1105: 8951-9450 Capsella grandiflora
Cagra.1105s0002 0.5kb downstream 0.5kb downstream 2426 true Scaffold1105: 6525-8950 Capsella grandiflora
Cagra.1105s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1105: 6525-7024 Capsella grandiflora
Cagra.1105s0002 1.0kb upstream 1.0kb upstream 2926 true Scaffold1105: 7025-9950 Capsella grandiflora
Cagra.1105s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1105: 8951-9950 Capsella grandiflora
Cagra.1105s0002 1.0kb downstream 1.0kb downstream 2926 true Scaffold1105: 6025-8950 Capsella grandiflora
Cagra.1105s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1105: 6025-7024 Capsella grandiflora
Cagra.1105s0002 2.0kb upstream 2.0kb upstream 3926 true Scaffold1105: 7025-10950 Capsella grandiflora
Cagra.1105s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1105: 8951-10950 Capsella grandiflora
Cagra.1105s0002 2.0kb downstream 2.0kb downstream 3926 true Scaffold1105: 5025-8950 Capsella grandiflora
Cagra.1105s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1105: 5025-7024 Capsella grandiflora
Cagra.1105s0002 5.0kb upstream 5.0kb upstream 6926 true Scaffold1105: 7025-13950 Capsella grandiflora
Cagra.1105s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1105: 8951-13950 Capsella grandiflora
Cagra.1105s0002 5.0kb downstream 5.0kb downstream 6926 true Scaffold1105: 2025-8950 Capsella grandiflora
Cagra.1105s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1105: 2025-7024 Capsella grandiflora
Cagra.1105s0002 10.0kb upstream 10.0kb upstream 11926 true Scaffold1105: 7025-18950 Capsella grandiflora
Cagra.1105s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1105: 8951-18950 Capsella grandiflora
Cagra.1105s0002 10.0kb downstream 10.0kb downstream 8950 true Scaffold1105: 1-8950 Capsella grandiflora
Cagra.1105s0002 10.0kb downstream 10.0kb downstream 7024 false Scaffold1105: 1-7024 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375807 5261 Brassicaceae View MSA
123840362 5264 Brassicales-Malvales View MSA
124340487 5266 SBM View MSA
124245797 5268 Malvidae View MSA
124063502 5270 Rosid View MSA
123746893 5271 Pentapetalae View MSA
122791489 5272 Eudicot View MSA
122045996 5273 Angiosperm View MSA
121344407 5274 Embryophyte View MSA
123380038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain