Gene : Cagra.1085s0086 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12565:SF125 - TRANSCRIPTION FACTOR HEC3-RELATED Genomic Order:  86
Name:  ? Cagra.1085s0086 Secondary Identifier:  ? PAC:28900560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1085s0086 0.5kb upstream 0.5kb upstream 1178 true Scaffold1085: 323783-324960 Capsella grandiflora
Cagra.1085s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold1085: 323783-324282 Capsella grandiflora
Cagra.1085s0086 0.5kb downstream 0.5kb downstream 1175 true Scaffold1085: 324283-325457 Capsella grandiflora
Cagra.1085s0086 0.5kb downstream 0.5kb downstream 497 false Scaffold1085: 324961-325457 Capsella grandiflora
Cagra.1085s0086 1.0kb upstream 1.0kb upstream 1678 true Scaffold1085: 323283-324960 Capsella grandiflora
Cagra.1085s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold1085: 323283-324282 Capsella grandiflora
Cagra.1085s0086 1.0kb downstream 1.0kb downstream 1175 true Scaffold1085: 324283-325457 Capsella grandiflora
Cagra.1085s0086 1.0kb downstream 1.0kb downstream 497 false Scaffold1085: 324961-325457 Capsella grandiflora
Cagra.1085s0086 2.0kb upstream 2.0kb upstream 2678 true Scaffold1085: 322283-324960 Capsella grandiflora
Cagra.1085s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold1085: 322283-324282 Capsella grandiflora
Cagra.1085s0086 2.0kb downstream 2.0kb downstream 1175 true Scaffold1085: 324283-325457 Capsella grandiflora
Cagra.1085s0086 2.0kb downstream 2.0kb downstream 497 false Scaffold1085: 324961-325457 Capsella grandiflora
Cagra.1085s0086 5.0kb upstream 5.0kb upstream 5678 true Scaffold1085: 319283-324960 Capsella grandiflora
Cagra.1085s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold1085: 319283-324282 Capsella grandiflora
Cagra.1085s0086 5.0kb downstream 5.0kb downstream 1175 true Scaffold1085: 324283-325457 Capsella grandiflora
Cagra.1085s0086 5.0kb downstream 5.0kb downstream 497 false Scaffold1085: 324961-325457 Capsella grandiflora
Cagra.1085s0086 10.0kb upstream 10.0kb upstream 10678 true Scaffold1085: 314283-324960 Capsella grandiflora
Cagra.1085s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold1085: 314283-324282 Capsella grandiflora
Cagra.1085s0086 10.0kb downstream 10.0kb downstream 1175 true Scaffold1085: 324283-325457 Capsella grandiflora
Cagra.1085s0086 10.0kb downstream 10.0kb downstream 497 false Scaffold1085: 324961-325457 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374077 5261 Brassicaceae View MSA
123830128 5264 Brassicales-Malvales View MSA
124321656 5266 SBM View MSA
124245239 5268 Malvidae View MSA
124065698 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain