Gene : Cagra.0117s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24078//PTHR24078:SF211 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  2
Name:  ? Cagra.0117s0002 Secondary Identifier:  ? PAC:28919144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0117s0002 0.5kb upstream 0.5kb upstream 1727 true Scaffold117: 10263-11989 Capsella grandiflora
Cagra.0117s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold117: 11490-11989 Capsella grandiflora
Cagra.0117s0002 0.5kb downstream 0.5kb downstream 1727 true Scaffold117: 9763-11489 Capsella grandiflora
Cagra.0117s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold117: 9763-10262 Capsella grandiflora
Cagra.0117s0002 1.0kb upstream 1.0kb upstream 2227 true Scaffold117: 10263-12489 Capsella grandiflora
Cagra.0117s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold117: 11490-12489 Capsella grandiflora
Cagra.0117s0002 1.0kb downstream 1.0kb downstream 2227 true Scaffold117: 9263-11489 Capsella grandiflora
Cagra.0117s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold117: 9263-10262 Capsella grandiflora
Cagra.0117s0002 2.0kb upstream 2.0kb upstream 3227 true Scaffold117: 10263-13489 Capsella grandiflora
Cagra.0117s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold117: 11490-13489 Capsella grandiflora
Cagra.0117s0002 2.0kb downstream 2.0kb downstream 3227 true Scaffold117: 8263-11489 Capsella grandiflora
Cagra.0117s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold117: 8263-10262 Capsella grandiflora
Cagra.0117s0002 5.0kb upstream 5.0kb upstream 6227 true Scaffold117: 10263-16489 Capsella grandiflora
Cagra.0117s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold117: 11490-16489 Capsella grandiflora
Cagra.0117s0002 5.0kb downstream 5.0kb downstream 6227 true Scaffold117: 5263-11489 Capsella grandiflora
Cagra.0117s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold117: 5263-10262 Capsella grandiflora
Cagra.0117s0002 10.0kb upstream 10.0kb upstream 11227 true Scaffold117: 10263-21489 Capsella grandiflora
Cagra.0117s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold117: 11490-21489 Capsella grandiflora
Cagra.0117s0002 10.0kb downstream 10.0kb downstream 11227 true Scaffold117: 263-11489 Capsella grandiflora
Cagra.0117s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold117: 263-10262 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332377 5261 Brassicaceae Singleton cluster - no MSA
123773452 5264 Brassicales-Malvales Singleton cluster - no MSA
124271937 5266 SBM Singleton cluster - no MSA
124127863 5268 Malvidae Singleton cluster - no MSA
124068520 5270 Rosid View MSA
123753293 5271 Pentapetalae View MSA
122794743 5272 Eudicot View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain