Gene : Cagra.11546s0011 C. grandiflora v1.1
Genomic Order:  11 Name:  ? Cagra.11546s0011
Secondary Identifier:  ? PAC:28897661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11546s0011 0.5kb upstream 0.5kb upstream 854 true Scaffold11546: 48348-49201 Capsella grandiflora
Cagra.11546s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold11546: 48702-49201 Capsella grandiflora
Cagra.11546s0011 0.5kb downstream 0.5kb downstream 854 true Scaffold11546: 47848-48701 Capsella grandiflora
Cagra.11546s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold11546: 47848-48347 Capsella grandiflora
Cagra.11546s0011 1.0kb upstream 1.0kb upstream 1354 true Scaffold11546: 48348-49701 Capsella grandiflora
Cagra.11546s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold11546: 48702-49701 Capsella grandiflora
Cagra.11546s0011 1.0kb downstream 1.0kb downstream 1354 true Scaffold11546: 47348-48701 Capsella grandiflora
Cagra.11546s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold11546: 47348-48347 Capsella grandiflora
Cagra.11546s0011 2.0kb upstream 2.0kb upstream 2354 true Scaffold11546: 48348-50701 Capsella grandiflora
Cagra.11546s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold11546: 48702-50701 Capsella grandiflora
Cagra.11546s0011 2.0kb downstream 2.0kb downstream 2354 true Scaffold11546: 46348-48701 Capsella grandiflora
Cagra.11546s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold11546: 46348-48347 Capsella grandiflora
Cagra.11546s0011 5.0kb upstream 5.0kb upstream 5354 true Scaffold11546: 48348-53701 Capsella grandiflora
Cagra.11546s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold11546: 48702-53701 Capsella grandiflora
Cagra.11546s0011 5.0kb downstream 5.0kb downstream 5354 true Scaffold11546: 43348-48701 Capsella grandiflora
Cagra.11546s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold11546: 43348-48347 Capsella grandiflora
Cagra.11546s0011 10.0kb upstream 10.0kb upstream 10354 true Scaffold11546: 48348-58701 Capsella grandiflora
Cagra.11546s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold11546: 48702-58701 Capsella grandiflora
Cagra.11546s0011 10.0kb downstream 10.0kb downstream 10354 true Scaffold11546: 38348-48701 Capsella grandiflora
Cagra.11546s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold11546: 38348-48347 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027257 5273 Angiosperm View MSA
122361378 5261 Brassicaceae View MSA
123798150 5264 Brassicales-Malvales View MSA
124350052 5266 SBM View MSA
124239881 5268 Malvidae View MSA
124050361 5270 Rosid View MSA
123741787 5271 Pentapetalae View MSA
122792737 5272 Eudicot View MSA
121296937 5274 Embryophyte View MSA
123335041 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain