Gene : Cagra.11315s0005 C. grandiflora v1.1
Defline:  (1 of 21) PF04398 - Protein of unknown function, DUF538 (DUF538) Genomic Order:  5
Name:  ? Cagra.11315s0005 Secondary Identifier:  ? PAC:28908222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.11315s0005 0.5kb upstream 0.5kb upstream 1204 true Scaffold11315: 23427-24630 Capsella grandiflora
Cagra.11315s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold11315: 23427-23926 Capsella grandiflora
Cagra.11315s0005 0.5kb downstream 0.5kb downstream 1204 true Scaffold11315: 23927-25130 Capsella grandiflora
Cagra.11315s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold11315: 24631-25130 Capsella grandiflora
Cagra.11315s0005 1.0kb upstream 1.0kb upstream 1704 true Scaffold11315: 22927-24630 Capsella grandiflora
Cagra.11315s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold11315: 22927-23926 Capsella grandiflora
Cagra.11315s0005 1.0kb downstream 1.0kb downstream 1704 true Scaffold11315: 23927-25630 Capsella grandiflora
Cagra.11315s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold11315: 24631-25630 Capsella grandiflora
Cagra.11315s0005 2.0kb upstream 2.0kb upstream 2704 true Scaffold11315: 21927-24630 Capsella grandiflora
Cagra.11315s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold11315: 21927-23926 Capsella grandiflora
Cagra.11315s0005 2.0kb downstream 2.0kb downstream 2704 true Scaffold11315: 23927-26630 Capsella grandiflora
Cagra.11315s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold11315: 24631-26630 Capsella grandiflora
Cagra.11315s0005 5.0kb upstream 5.0kb upstream 5704 true Scaffold11315: 18927-24630 Capsella grandiflora
Cagra.11315s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold11315: 18927-23926 Capsella grandiflora
Cagra.11315s0005 5.0kb downstream 5.0kb downstream 5704 true Scaffold11315: 23927-29630 Capsella grandiflora
Cagra.11315s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold11315: 24631-29630 Capsella grandiflora
Cagra.11315s0005 10.0kb upstream 10.0kb upstream 10704 true Scaffold11315: 13927-24630 Capsella grandiflora
Cagra.11315s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold11315: 13927-23926 Capsella grandiflora
Cagra.11315s0005 10.0kb downstream 10.0kb downstream 10704 true Scaffold11315: 23927-34630 Capsella grandiflora
Cagra.11315s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold11315: 24631-34630 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379974 5261 Brassicaceae View MSA
123839785 5264 Brassicales-Malvales View MSA
124338834 5266 SBM View MSA
124238463 5268 Malvidae View MSA
124067274 5270 Rosid View MSA
123752755 5271 Pentapetalae View MSA
122794473 5272 Eudicot View MSA
122046318 5273 Angiosperm View MSA
121348392 5274 Embryophyte View MSA
123380844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain