Gene : Cagra.0114s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10024:SF197 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  43
Name:  ? Cagra.0114s0043 Secondary Identifier:  ? PAC:28915806
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0043 0.5kb upstream 0.5kb upstream 3584 true Scaffold114: 166432-170015 Capsella grandiflora
Cagra.0114s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 169516-170015 Capsella grandiflora
Cagra.0114s0043 0.5kb downstream 0.5kb downstream 3584 true Scaffold114: 165932-169515 Capsella grandiflora
Cagra.0114s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 165932-166431 Capsella grandiflora
Cagra.0114s0043 1.0kb upstream 1.0kb upstream 4084 true Scaffold114: 166432-170515 Capsella grandiflora
Cagra.0114s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 169516-170515 Capsella grandiflora
Cagra.0114s0043 1.0kb downstream 1.0kb downstream 4084 true Scaffold114: 165432-169515 Capsella grandiflora
Cagra.0114s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 165432-166431 Capsella grandiflora
Cagra.0114s0043 2.0kb upstream 2.0kb upstream 5084 true Scaffold114: 166432-171515 Capsella grandiflora
Cagra.0114s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 169516-171515 Capsella grandiflora
Cagra.0114s0043 2.0kb downstream 2.0kb downstream 5084 true Scaffold114: 164432-169515 Capsella grandiflora
Cagra.0114s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 164432-166431 Capsella grandiflora
Cagra.0114s0043 5.0kb upstream 5.0kb upstream 8084 true Scaffold114: 166432-174515 Capsella grandiflora
Cagra.0114s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 169516-174515 Capsella grandiflora
Cagra.0114s0043 5.0kb downstream 5.0kb downstream 8084 true Scaffold114: 161432-169515 Capsella grandiflora
Cagra.0114s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 161432-166431 Capsella grandiflora
Cagra.0114s0043 10.0kb upstream 10.0kb upstream 13084 true Scaffold114: 166432-179515 Capsella grandiflora
Cagra.0114s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 169516-179515 Capsella grandiflora
Cagra.0114s0043 10.0kb downstream 10.0kb downstream 13084 true Scaffold114: 156432-169515 Capsella grandiflora
Cagra.0114s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 156432-166431 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026435 5273 Angiosperm View MSA
122368560 5261 Brassicaceae View MSA
123830217 5264 Brassicales-Malvales View MSA
124341906 5266 SBM View MSA
124241734 5268 Malvidae View MSA
124063760 5270 Rosid View MSA
123752822 5271 Pentapetalae View MSA
122787154 5272 Eudicot View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain