Gene : Cagra.1226s0003 C. grandiflora v1.1
Defline:  (1 of 9) PF05633 - Protein of unknown function (DUF793) (DUF793) Genomic Order:  3
Name:  ? Cagra.1226s0003 Secondary Identifier:  ? PAC:28916477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0003 0.5kb upstream 0.5kb upstream 2402 true Scaffold1226: 14668-17069 Capsella grandiflora
Cagra.1226s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 16570-17069 Capsella grandiflora
Cagra.1226s0003 0.5kb downstream 0.5kb downstream 2402 true Scaffold1226: 14168-16569 Capsella grandiflora
Cagra.1226s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 14168-14667 Capsella grandiflora
Cagra.1226s0003 1.0kb upstream 1.0kb upstream 2902 true Scaffold1226: 14668-17569 Capsella grandiflora
Cagra.1226s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 16570-17569 Capsella grandiflora
Cagra.1226s0003 1.0kb downstream 1.0kb downstream 2902 true Scaffold1226: 13668-16569 Capsella grandiflora
Cagra.1226s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 13668-14667 Capsella grandiflora
Cagra.1226s0003 2.0kb upstream 2.0kb upstream 3902 true Scaffold1226: 14668-18569 Capsella grandiflora
Cagra.1226s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 16570-18569 Capsella grandiflora
Cagra.1226s0003 2.0kb downstream 2.0kb downstream 3902 true Scaffold1226: 12668-16569 Capsella grandiflora
Cagra.1226s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 12668-14667 Capsella grandiflora
Cagra.1226s0003 5.0kb upstream 5.0kb upstream 6902 true Scaffold1226: 14668-21569 Capsella grandiflora
Cagra.1226s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 16570-21569 Capsella grandiflora
Cagra.1226s0003 5.0kb downstream 5.0kb downstream 6902 true Scaffold1226: 9668-16569 Capsella grandiflora
Cagra.1226s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 9668-14667 Capsella grandiflora
Cagra.1226s0003 10.0kb upstream 10.0kb upstream 11902 true Scaffold1226: 14668-26569 Capsella grandiflora
Cagra.1226s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 16570-26569 Capsella grandiflora
Cagra.1226s0003 10.0kb downstream 10.0kb downstream 11902 true Scaffold1226: 4668-16569 Capsella grandiflora
Cagra.1226s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 4668-14667 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371249 5261 Brassicaceae View MSA
123840553 5264 Brassicales-Malvales View MSA
124341443 5266 SBM View MSA
124251504 5268 Malvidae View MSA
124065163 5270 Rosid View MSA
123741032 5271 Pentapetalae View MSA
122770001 5272 Eudicot View MSA
122049530 5273 Angiosperm View MSA
121311457 5274 Embryophyte View MSA
123348752 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain