Gene : Cagra.1226s0033 C. grandiflora v1.1
Defline:  (1 of 4) PTHR21495:SF40 - DIRIGENT PROTEIN 12-RELATED Genomic Order:  33
Name:  ? Cagra.1226s0033 Secondary Identifier:  ? PAC:28916566
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1226s0033 0.5kb upstream 0.5kb upstream 1244 true Scaffold1226: 127853-129096 Capsella grandiflora
Cagra.1226s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold1226: 128597-129096 Capsella grandiflora
Cagra.1226s0033 0.5kb downstream 0.5kb downstream 1244 true Scaffold1226: 127353-128596 Capsella grandiflora
Cagra.1226s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold1226: 127353-127852 Capsella grandiflora
Cagra.1226s0033 1.0kb upstream 1.0kb upstream 1744 true Scaffold1226: 127853-129596 Capsella grandiflora
Cagra.1226s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold1226: 128597-129596 Capsella grandiflora
Cagra.1226s0033 1.0kb downstream 1.0kb downstream 1744 true Scaffold1226: 126853-128596 Capsella grandiflora
Cagra.1226s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold1226: 126853-127852 Capsella grandiflora
Cagra.1226s0033 2.0kb upstream 2.0kb upstream 2744 true Scaffold1226: 127853-130596 Capsella grandiflora
Cagra.1226s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold1226: 128597-130596 Capsella grandiflora
Cagra.1226s0033 2.0kb downstream 2.0kb downstream 2744 true Scaffold1226: 125853-128596 Capsella grandiflora
Cagra.1226s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold1226: 125853-127852 Capsella grandiflora
Cagra.1226s0033 5.0kb upstream 5.0kb upstream 5744 true Scaffold1226: 127853-133596 Capsella grandiflora
Cagra.1226s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold1226: 128597-133596 Capsella grandiflora
Cagra.1226s0033 5.0kb downstream 5.0kb downstream 5744 true Scaffold1226: 122853-128596 Capsella grandiflora
Cagra.1226s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold1226: 122853-127852 Capsella grandiflora
Cagra.1226s0033 10.0kb upstream 10.0kb upstream 10744 true Scaffold1226: 127853-138596 Capsella grandiflora
Cagra.1226s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold1226: 128597-138596 Capsella grandiflora
Cagra.1226s0033 10.0kb downstream 10.0kb downstream 10744 true Scaffold1226: 117853-128596 Capsella grandiflora
Cagra.1226s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold1226: 117853-127852 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377977 5261 Brassicaceae View MSA
123839086 5264 Brassicales-Malvales View MSA
124348293 5266 SBM View MSA
124245400 5268 Malvidae View MSA
124071595 5270 Rosid View MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain