Gene : Cagra.1216s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR19370:SF120 - FERREDOXIN-1, CHLOROPLASTIC-RELATED Genomic Order:  11
Name:  ? Cagra.1216s0011 Secondary Identifier:  ? PAC:28916749
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1216s0011 0.5kb upstream 0.5kb upstream 1159 true Scaffold1216: 53292-54450 Capsella grandiflora
Cagra.1216s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold1216: 53292-53791 Capsella grandiflora
Cagra.1216s0011 0.5kb downstream 0.5kb downstream 1159 true Scaffold1216: 53792-54950 Capsella grandiflora
Cagra.1216s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold1216: 54451-54950 Capsella grandiflora
Cagra.1216s0011 1.0kb upstream 1.0kb upstream 1659 true Scaffold1216: 52792-54450 Capsella grandiflora
Cagra.1216s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold1216: 52792-53791 Capsella grandiflora
Cagra.1216s0011 1.0kb downstream 1.0kb downstream 1659 true Scaffold1216: 53792-55450 Capsella grandiflora
Cagra.1216s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold1216: 54451-55450 Capsella grandiflora
Cagra.1216s0011 2.0kb upstream 2.0kb upstream 2659 true Scaffold1216: 51792-54450 Capsella grandiflora
Cagra.1216s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold1216: 51792-53791 Capsella grandiflora
Cagra.1216s0011 2.0kb downstream 2.0kb downstream 2659 true Scaffold1216: 53792-56450 Capsella grandiflora
Cagra.1216s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold1216: 54451-56450 Capsella grandiflora
Cagra.1216s0011 5.0kb upstream 5.0kb upstream 5659 true Scaffold1216: 48792-54450 Capsella grandiflora
Cagra.1216s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold1216: 48792-53791 Capsella grandiflora
Cagra.1216s0011 5.0kb downstream 5.0kb downstream 5659 true Scaffold1216: 53792-59450 Capsella grandiflora
Cagra.1216s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold1216: 54451-59450 Capsella grandiflora
Cagra.1216s0011 10.0kb upstream 10.0kb upstream 10659 true Scaffold1216: 43792-54450 Capsella grandiflora
Cagra.1216s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold1216: 43792-53791 Capsella grandiflora
Cagra.1216s0011 10.0kb downstream 10.0kb downstream 10659 true Scaffold1216: 53792-64450 Capsella grandiflora
Cagra.1216s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold1216: 54451-64450 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363378 5261 Brassicaceae View MSA
123837584 5264 Brassicales-Malvales View MSA
124351499 5266 SBM View MSA
124253066 5268 Malvidae View MSA
124069185 5270 Rosid View MSA
123748540 5271 Pentapetalae View MSA
122797784 5272 Eudicot View MSA
122047463 5273 Angiosperm View MSA
123429005 5275 Viridiplantae View MSA
121350651 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain