Gene : Cagra.12196s0002 C. grandiflora v1.1
Defline:  (1 of 5) PF13952 - Domain of unknown function (DUF4216) (DUF4216) Genomic Order:  2
Name:  ? Cagra.12196s0002 Secondary Identifier:  ? PAC:28915718
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12196s0002 0.5kb upstream 0.5kb upstream 1073 true Scaffold12196: 11335-12407 Capsella grandiflora
Cagra.12196s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12196: 11335-11834 Capsella grandiflora
Cagra.12196s0002 0.5kb downstream 0.5kb downstream 1073 true Scaffold12196: 11835-12907 Capsella grandiflora
Cagra.12196s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12196: 12408-12907 Capsella grandiflora
Cagra.12196s0002 1.0kb upstream 1.0kb upstream 1573 true Scaffold12196: 10835-12407 Capsella grandiflora
Cagra.12196s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12196: 10835-11834 Capsella grandiflora
Cagra.12196s0002 1.0kb downstream 1.0kb downstream 1573 true Scaffold12196: 11835-13407 Capsella grandiflora
Cagra.12196s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12196: 12408-13407 Capsella grandiflora
Cagra.12196s0002 2.0kb upstream 2.0kb upstream 2573 true Scaffold12196: 9835-12407 Capsella grandiflora
Cagra.12196s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold12196: 9835-11834 Capsella grandiflora
Cagra.12196s0002 2.0kb downstream 2.0kb downstream 2573 true Scaffold12196: 11835-14407 Capsella grandiflora
Cagra.12196s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold12196: 12408-14407 Capsella grandiflora
Cagra.12196s0002 5.0kb upstream 5.0kb upstream 5573 true Scaffold12196: 6835-12407 Capsella grandiflora
Cagra.12196s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold12196: 6835-11834 Capsella grandiflora
Cagra.12196s0002 5.0kb downstream 5.0kb downstream 5573 true Scaffold12196: 11835-17407 Capsella grandiflora
Cagra.12196s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold12196: 12408-17407 Capsella grandiflora
Cagra.12196s0002 10.0kb upstream 10.0kb upstream 10573 true Scaffold12196: 1835-12407 Capsella grandiflora
Cagra.12196s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold12196: 1835-11834 Capsella grandiflora
Cagra.12196s0002 10.0kb downstream 10.0kb downstream 10573 true Scaffold12196: 11835-22407 Capsella grandiflora
Cagra.12196s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold12196: 12408-22407 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332416 5261 Brassicaceae Singleton cluster - no MSA
123773489 5264 Brassicales-Malvales Singleton cluster - no MSA
124350071 5266 SBM View MSA
124181067 5268 Malvidae View MSA
124037939 5270 Rosid View MSA
123753147 5271 Pentapetalae View MSA
122797842 5272 Eudicot View MSA
122048825 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain