Gene : Cagra.12076s0007 C. grandiflora v1.1
Defline:  (1 of 8) PTHR11413 - CYSTATIN FAMILY MEMBER Genomic Order:  7
Name:  ? Cagra.12076s0007 Secondary Identifier:  ? PAC:28907615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12076s0007 0.5kb upstream 0.5kb upstream 1056 true Scaffold12076: 14078-15133 Capsella grandiflora
Cagra.12076s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold12076: 14078-14577 Capsella grandiflora
Cagra.12076s0007 0.5kb downstream 0.5kb downstream 1056 true Scaffold12076: 14578-15633 Capsella grandiflora
Cagra.12076s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold12076: 15134-15633 Capsella grandiflora
Cagra.12076s0007 1.0kb upstream 1.0kb upstream 1556 true Scaffold12076: 13578-15133 Capsella grandiflora
Cagra.12076s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold12076: 13578-14577 Capsella grandiflora
Cagra.12076s0007 1.0kb downstream 1.0kb downstream 1556 true Scaffold12076: 14578-16133 Capsella grandiflora
Cagra.12076s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold12076: 15134-16133 Capsella grandiflora
Cagra.12076s0007 2.0kb upstream 2.0kb upstream 2556 true Scaffold12076: 12578-15133 Capsella grandiflora
Cagra.12076s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold12076: 12578-14577 Capsella grandiflora
Cagra.12076s0007 2.0kb downstream 2.0kb downstream 2556 true Scaffold12076: 14578-17133 Capsella grandiflora
Cagra.12076s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold12076: 15134-17133 Capsella grandiflora
Cagra.12076s0007 5.0kb upstream 5.0kb upstream 5556 true Scaffold12076: 9578-15133 Capsella grandiflora
Cagra.12076s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold12076: 9578-14577 Capsella grandiflora
Cagra.12076s0007 5.0kb downstream 5.0kb downstream 5556 true Scaffold12076: 14578-20133 Capsella grandiflora
Cagra.12076s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold12076: 15134-20133 Capsella grandiflora
Cagra.12076s0007 10.0kb upstream 10.0kb upstream 10556 true Scaffold12076: 4578-15133 Capsella grandiflora
Cagra.12076s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold12076: 4578-14577 Capsella grandiflora
Cagra.12076s0007 10.0kb downstream 10.0kb downstream 10556 true Scaffold12076: 14578-25133 Capsella grandiflora
Cagra.12076s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold12076: 15134-25133 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370379 5261 Brassicaceae View MSA
123799951 5264 Brassicales-Malvales View MSA
124297419 5266 SBM View MSA
124149314 5268 Malvidae View MSA
124072970 5270 Rosid View MSA
123747344 5271 Pentapetalae View MSA
122796590 5272 Eudicot View MSA
122051666 5273 Angiosperm View MSA
121351690 5274 Embryophyte View MSA
123426487 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain