Gene : Cagra.12076s0003 C. grandiflora v1.1
Defline:  (1 of 3) PF15054 - Domain of unknown function (DUF4535) (DUF4535) Genomic Order:  3
Name:  ? Cagra.12076s0003 Secondary Identifier:  ? PAC:28907614
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12076s0003 0.5kb upstream 0.5kb upstream 1044 true Scaffold12076: 5700-6743 Capsella grandiflora
Cagra.12076s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold12076: 6244-6743 Capsella grandiflora
Cagra.12076s0003 0.5kb downstream 0.5kb downstream 1044 true Scaffold12076: 5200-6243 Capsella grandiflora
Cagra.12076s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold12076: 5200-5699 Capsella grandiflora
Cagra.12076s0003 1.0kb upstream 1.0kb upstream 1544 true Scaffold12076: 5700-7243 Capsella grandiflora
Cagra.12076s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold12076: 6244-7243 Capsella grandiflora
Cagra.12076s0003 1.0kb downstream 1.0kb downstream 1544 true Scaffold12076: 4700-6243 Capsella grandiflora
Cagra.12076s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold12076: 4700-5699 Capsella grandiflora
Cagra.12076s0003 2.0kb upstream 2.0kb upstream 2544 true Scaffold12076: 5700-8243 Capsella grandiflora
Cagra.12076s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold12076: 6244-8243 Capsella grandiflora
Cagra.12076s0003 2.0kb downstream 2.0kb downstream 2544 true Scaffold12076: 3700-6243 Capsella grandiflora
Cagra.12076s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold12076: 3700-5699 Capsella grandiflora
Cagra.12076s0003 5.0kb upstream 5.0kb upstream 5544 true Scaffold12076: 5700-11243 Capsella grandiflora
Cagra.12076s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold12076: 6244-11243 Capsella grandiflora
Cagra.12076s0003 5.0kb downstream 5.0kb downstream 5544 true Scaffold12076: 700-6243 Capsella grandiflora
Cagra.12076s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold12076: 700-5699 Capsella grandiflora
Cagra.12076s0003 10.0kb upstream 10.0kb upstream 10544 true Scaffold12076: 5700-16243 Capsella grandiflora
Cagra.12076s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold12076: 6244-16243 Capsella grandiflora
Cagra.12076s0003 10.0kb downstream 10.0kb downstream 6243 true Scaffold12076: 1-6243 Capsella grandiflora
Cagra.12076s0003 10.0kb downstream 10.0kb downstream 5699 false Scaffold12076: 1-5699 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029837 5273 Angiosperm View MSA
122344029 5261 Brassicaceae View MSA
123784091 5264 Brassicales-Malvales View MSA
124282291 5266 SBM View MSA
124136920 5268 Malvidae View MSA
123864703 5270 Rosid View MSA
123449989 5271 Pentapetalae View MSA
122485516 5272 Eudicot View MSA
121343787 5274 Embryophyte View MSA
123379919 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain