Gene : Cagra.12804s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13871//PTHR13871:SF50 - THIOREDOXIN Genomic Order:  2
Name:  ? Cagra.12804s0002 Secondary Identifier:  ? PAC:28918758
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12804s0002 0.5kb upstream 0.5kb upstream 1444 true Scaffold12804: 525-1968 Capsella grandiflora
Cagra.12804s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12804: 525-1024 Capsella grandiflora
Cagra.12804s0002 0.5kb downstream 0.5kb downstream 1444 true Scaffold12804: 1025-2468 Capsella grandiflora
Cagra.12804s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12804: 1969-2468 Capsella grandiflora
Cagra.12804s0002 1.0kb upstream 1.0kb upstream 1944 true Scaffold12804: 25-1968 Capsella grandiflora
Cagra.12804s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12804: 25-1024 Capsella grandiflora
Cagra.12804s0002 1.0kb downstream 1.0kb downstream 1944 true Scaffold12804: 1025-2968 Capsella grandiflora
Cagra.12804s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12804: 1969-2968 Capsella grandiflora
Cagra.12804s0002 2.0kb upstream 2.0kb upstream 1968 true Scaffold12804: 1-1968 Capsella grandiflora
Cagra.12804s0002 2.0kb upstream 2.0kb upstream 1024 false Scaffold12804: 1-1024 Capsella grandiflora
Cagra.12804s0002 2.0kb downstream 2.0kb downstream 2944 true Scaffold12804: 1025-3968 Capsella grandiflora
Cagra.12804s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold12804: 1969-3968 Capsella grandiflora
Cagra.12804s0002 5.0kb upstream 5.0kb upstream 1968 true Scaffold12804: 1-1968 Capsella grandiflora
Cagra.12804s0002 5.0kb upstream 5.0kb upstream 1024 false Scaffold12804: 1-1024 Capsella grandiflora
Cagra.12804s0002 5.0kb downstream 5.0kb downstream 5944 true Scaffold12804: 1025-6968 Capsella grandiflora
Cagra.12804s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold12804: 1969-6968 Capsella grandiflora
Cagra.12804s0002 10.0kb upstream 10.0kb upstream 1968 true Scaffold12804: 1-1968 Capsella grandiflora
Cagra.12804s0002 10.0kb upstream 10.0kb upstream 1024 false Scaffold12804: 1-1024 Capsella grandiflora
Cagra.12804s0002 10.0kb downstream 10.0kb downstream 10944 true Scaffold12804: 1025-11968 Capsella grandiflora
Cagra.12804s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold12804: 1969-11968 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374924 5261 Brassicaceae View MSA
123834863 5264 Brassicales-Malvales View MSA
124345967 5266 SBM View MSA
124254398 5268 Malvidae View MSA
124074653 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain