Gene : Cagra.1268s0014 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF29 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  14
Name:  ? Cagra.1268s0014 Secondary Identifier:  ? PAC:28893624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1268s0014 0.5kb upstream 0.5kb upstream 1403 true Scaffold1268: 40353-41755 Capsella grandiflora
Cagra.1268s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold1268: 40353-40852 Capsella grandiflora
Cagra.1268s0014 0.5kb downstream 0.5kb downstream 1403 true Scaffold1268: 40853-42255 Capsella grandiflora
Cagra.1268s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold1268: 41756-42255 Capsella grandiflora
Cagra.1268s0014 1.0kb upstream 1.0kb upstream 1903 true Scaffold1268: 39853-41755 Capsella grandiflora
Cagra.1268s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold1268: 39853-40852 Capsella grandiflora
Cagra.1268s0014 1.0kb downstream 1.0kb downstream 1903 true Scaffold1268: 40853-42755 Capsella grandiflora
Cagra.1268s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold1268: 41756-42755 Capsella grandiflora
Cagra.1268s0014 2.0kb upstream 2.0kb upstream 2903 true Scaffold1268: 38853-41755 Capsella grandiflora
Cagra.1268s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold1268: 38853-40852 Capsella grandiflora
Cagra.1268s0014 2.0kb downstream 2.0kb downstream 2903 true Scaffold1268: 40853-43755 Capsella grandiflora
Cagra.1268s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold1268: 41756-43755 Capsella grandiflora
Cagra.1268s0014 5.0kb upstream 5.0kb upstream 5903 true Scaffold1268: 35853-41755 Capsella grandiflora
Cagra.1268s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold1268: 35853-40852 Capsella grandiflora
Cagra.1268s0014 5.0kb downstream 5.0kb downstream 5903 true Scaffold1268: 40853-46755 Capsella grandiflora
Cagra.1268s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold1268: 41756-46755 Capsella grandiflora
Cagra.1268s0014 10.0kb upstream 10.0kb upstream 10903 true Scaffold1268: 30853-41755 Capsella grandiflora
Cagra.1268s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold1268: 30853-40852 Capsella grandiflora
Cagra.1268s0014 10.0kb downstream 10.0kb downstream 10903 true Scaffold1268: 40853-51755 Capsella grandiflora
Cagra.1268s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold1268: 41756-51755 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364230 5261 Brassicaceae View MSA
123837773 5264 Brassicales-Malvales View MSA
124350524 5266 SBM View MSA
124243278 5268 Malvidae View MSA
124068390 5270 Rosid View MSA
123738085 5271 Pentapetalae View MSA
122788198 5272 Eudicot View MSA
122043341 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain