Gene : Cagra.1246s0001 C. grandiflora v1.1
Defline:  (1 of 61) PF14368 - Probable lipid transfer (LTP_2) Genomic Order:  1
Name:  ? Cagra.1246s0001 Secondary Identifier:  ? PAC:28894476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1246s0001 0.5kb upstream 0.5kb upstream 567 true Scaffold1246: 1-567 Capsella grandiflora
Cagra.1246s0001 0.5kb upstream 0.5kb upstream 258 false Scaffold1246: 1-258 Capsella grandiflora
Cagra.1246s0001 0.5kb downstream 0.5kb downstream 809 true Scaffold1246: 259-1067 Capsella grandiflora
Cagra.1246s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1246: 568-1067 Capsella grandiflora
Cagra.1246s0001 1.0kb upstream 1.0kb upstream 567 true Scaffold1246: 1-567 Capsella grandiflora
Cagra.1246s0001 1.0kb upstream 1.0kb upstream 258 false Scaffold1246: 1-258 Capsella grandiflora
Cagra.1246s0001 1.0kb downstream 1.0kb downstream 1309 true Scaffold1246: 259-1567 Capsella grandiflora
Cagra.1246s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1246: 568-1567 Capsella grandiflora
Cagra.1246s0001 2.0kb upstream 2.0kb upstream 567 true Scaffold1246: 1-567 Capsella grandiflora
Cagra.1246s0001 2.0kb upstream 2.0kb upstream 258 false Scaffold1246: 1-258 Capsella grandiflora
Cagra.1246s0001 2.0kb downstream 2.0kb downstream 2309 true Scaffold1246: 259-2567 Capsella grandiflora
Cagra.1246s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1246: 568-2567 Capsella grandiflora
Cagra.1246s0001 5.0kb upstream 5.0kb upstream 567 true Scaffold1246: 1-567 Capsella grandiflora
Cagra.1246s0001 5.0kb upstream 5.0kb upstream 258 false Scaffold1246: 1-258 Capsella grandiflora
Cagra.1246s0001 5.0kb downstream 5.0kb downstream 5309 true Scaffold1246: 259-5567 Capsella grandiflora
Cagra.1246s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1246: 568-5567 Capsella grandiflora
Cagra.1246s0001 10.0kb upstream 10.0kb upstream 567 true Scaffold1246: 1-567 Capsella grandiflora
Cagra.1246s0001 10.0kb upstream 10.0kb upstream 258 false Scaffold1246: 1-258 Capsella grandiflora
Cagra.1246s0001 10.0kb downstream 10.0kb downstream 10309 true Scaffold1246: 259-10567 Capsella grandiflora
Cagra.1246s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1246: 568-10567 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378931 5261 Brassicaceae View MSA
123840478 5264 Brassicales-Malvales View MSA
124351607 5266 SBM View MSA
124244108 5268 Malvidae View MSA
124070534 5270 Rosid View MSA
123751813 5271 Pentapetalae View MSA
122793569 5272 Eudicot View MSA
122044462 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain