Gene : Cagra.1261s0006 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31636:SF11 - SCARECROW-LIKE PROTEIN 22-RELATED Genomic Order:  6
Name:  ? Cagra.1261s0006 Secondary Identifier:  ? PAC:28895209
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1261s0006 0.5kb upstream 0.5kb upstream 2156 true Scaffold1261: 22203-24358 Capsella grandiflora
Cagra.1261s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1261: 23859-24358 Capsella grandiflora
Cagra.1261s0006 0.5kb downstream 0.5kb downstream 2156 true Scaffold1261: 21703-23858 Capsella grandiflora
Cagra.1261s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1261: 21703-22202 Capsella grandiflora
Cagra.1261s0006 1.0kb upstream 1.0kb upstream 2656 true Scaffold1261: 22203-24858 Capsella grandiflora
Cagra.1261s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1261: 23859-24858 Capsella grandiflora
Cagra.1261s0006 1.0kb downstream 1.0kb downstream 2656 true Scaffold1261: 21203-23858 Capsella grandiflora
Cagra.1261s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1261: 21203-22202 Capsella grandiflora
Cagra.1261s0006 2.0kb upstream 2.0kb upstream 3656 true Scaffold1261: 22203-25858 Capsella grandiflora
Cagra.1261s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1261: 23859-25858 Capsella grandiflora
Cagra.1261s0006 2.0kb downstream 2.0kb downstream 3656 true Scaffold1261: 20203-23858 Capsella grandiflora
Cagra.1261s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1261: 20203-22202 Capsella grandiflora
Cagra.1261s0006 5.0kb upstream 5.0kb upstream 6656 true Scaffold1261: 22203-28858 Capsella grandiflora
Cagra.1261s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1261: 23859-28858 Capsella grandiflora
Cagra.1261s0006 5.0kb downstream 5.0kb downstream 6656 true Scaffold1261: 17203-23858 Capsella grandiflora
Cagra.1261s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1261: 17203-22202 Capsella grandiflora
Cagra.1261s0006 10.0kb upstream 10.0kb upstream 11656 true Scaffold1261: 22203-33858 Capsella grandiflora
Cagra.1261s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1261: 23859-33858 Capsella grandiflora
Cagra.1261s0006 10.0kb downstream 10.0kb downstream 11656 true Scaffold1261: 12203-23858 Capsella grandiflora
Cagra.1261s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1261: 12203-22202 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367532 5261 Brassicaceae View MSA
123841679 5264 Brassicales-Malvales View MSA
124337623 5266 SBM View MSA
124250947 5268 Malvidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain