Gene : Cagra.12364s0002 C. grandiflora v1.1
Defline:  (1 of 2) PF11204 - Protein of unknown function (DUF2985) (DUF2985) Genomic Order:  2
Name:  ? Cagra.12364s0002 Secondary Identifier:  ? PAC:28904745
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12364s0002 0.5kb upstream 0.5kb upstream 2171 true Scaffold12364: 7984-10154 Capsella grandiflora
Cagra.12364s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold12364: 7984-8483 Capsella grandiflora
Cagra.12364s0002 0.5kb downstream 0.5kb downstream 2171 true Scaffold12364: 8484-10654 Capsella grandiflora
Cagra.12364s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold12364: 10155-10654 Capsella grandiflora
Cagra.12364s0002 1.0kb upstream 1.0kb upstream 2671 true Scaffold12364: 7484-10154 Capsella grandiflora
Cagra.12364s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold12364: 7484-8483 Capsella grandiflora
Cagra.12364s0002 1.0kb downstream 1.0kb downstream 2671 true Scaffold12364: 8484-11154 Capsella grandiflora
Cagra.12364s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold12364: 10155-11154 Capsella grandiflora
Cagra.12364s0002 2.0kb upstream 2.0kb upstream 3671 true Scaffold12364: 6484-10154 Capsella grandiflora
Cagra.12364s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold12364: 6484-8483 Capsella grandiflora
Cagra.12364s0002 2.0kb downstream 2.0kb downstream 3671 true Scaffold12364: 8484-12154 Capsella grandiflora
Cagra.12364s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold12364: 10155-12154 Capsella grandiflora
Cagra.12364s0002 5.0kb upstream 5.0kb upstream 6671 true Scaffold12364: 3484-10154 Capsella grandiflora
Cagra.12364s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold12364: 3484-8483 Capsella grandiflora
Cagra.12364s0002 5.0kb downstream 5.0kb downstream 6294 true Scaffold12364: 8484-14777 Capsella grandiflora
Cagra.12364s0002 5.0kb downstream 5.0kb downstream 4623 false Scaffold12364: 10155-14777 Capsella grandiflora
Cagra.12364s0002 10.0kb upstream 10.0kb upstream 10154 true Scaffold12364: 1-10154 Capsella grandiflora
Cagra.12364s0002 10.0kb upstream 10.0kb upstream 8483 false Scaffold12364: 1-8483 Capsella grandiflora
Cagra.12364s0002 10.0kb downstream 10.0kb downstream 6294 true Scaffold12364: 8484-14777 Capsella grandiflora
Cagra.12364s0002 10.0kb downstream 10.0kb downstream 4623 false Scaffold12364: 10155-14777 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381538 5261 Brassicaceae View MSA
123834088 5264 Brassicales-Malvales View MSA
124343175 5266 SBM View MSA
124239250 5268 Malvidae View MSA
124061942 5270 Rosid View MSA
123744852 5271 Pentapetalae View MSA
122790012 5272 Eudicot View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain