Gene : Cagra.12385s0003 C. grandiflora v1.1
Defline:  (1 of 19) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  3
Name:  ? Cagra.12385s0003 Secondary Identifier:  ? PAC:28896842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.12385s0003 0.5kb upstream 0.5kb upstream 1912 true Scaffold12385: 4811-6722 Capsella grandiflora
Cagra.12385s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold12385: 4811-5310 Capsella grandiflora
Cagra.12385s0003 0.5kb downstream 0.5kb downstream 1912 true Scaffold12385: 5311-7222 Capsella grandiflora
Cagra.12385s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold12385: 6723-7222 Capsella grandiflora
Cagra.12385s0003 1.0kb upstream 1.0kb upstream 2412 true Scaffold12385: 4311-6722 Capsella grandiflora
Cagra.12385s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold12385: 4311-5310 Capsella grandiflora
Cagra.12385s0003 1.0kb downstream 1.0kb downstream 2412 true Scaffold12385: 5311-7722 Capsella grandiflora
Cagra.12385s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold12385: 6723-7722 Capsella grandiflora
Cagra.12385s0003 2.0kb upstream 2.0kb upstream 3412 true Scaffold12385: 3311-6722 Capsella grandiflora
Cagra.12385s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold12385: 3311-5310 Capsella grandiflora
Cagra.12385s0003 2.0kb downstream 2.0kb downstream 3412 true Scaffold12385: 5311-8722 Capsella grandiflora
Cagra.12385s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold12385: 6723-8722 Capsella grandiflora
Cagra.12385s0003 5.0kb upstream 5.0kb upstream 6412 true Scaffold12385: 311-6722 Capsella grandiflora
Cagra.12385s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold12385: 311-5310 Capsella grandiflora
Cagra.12385s0003 5.0kb downstream 5.0kb downstream 6412 true Scaffold12385: 5311-11722 Capsella grandiflora
Cagra.12385s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold12385: 6723-11722 Capsella grandiflora
Cagra.12385s0003 10.0kb upstream 10.0kb upstream 6722 true Scaffold12385: 1-6722 Capsella grandiflora
Cagra.12385s0003 10.0kb upstream 10.0kb upstream 5310 false Scaffold12385: 1-5310 Capsella grandiflora
Cagra.12385s0003 10.0kb downstream 10.0kb downstream 11412 true Scaffold12385: 5311-16722 Capsella grandiflora
Cagra.12385s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold12385: 6723-16722 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379586 5261 Brassicaceae View MSA
123839578 5264 Brassicales-Malvales View MSA
124350743 5266 SBM View MSA
124254082 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain