Gene : Cagra.1317s0069 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31636:SF46 - SCARECROW-LIKE PROTEIN 11-RELATED Genomic Order:  69
Name:  ? Cagra.1317s0069 Secondary Identifier:  ? PAC:28910449
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1317s0069 0.5kb upstream 0.5kb upstream 2831 true Scaffold1317: 236057-238887 Capsella grandiflora
Cagra.1317s0069 0.5kb upstream 0.5kb upstream 500 false Scaffold1317: 238388-238887 Capsella grandiflora
Cagra.1317s0069 0.5kb downstream 0.5kb downstream 2831 true Scaffold1317: 235557-238387 Capsella grandiflora
Cagra.1317s0069 0.5kb downstream 0.5kb downstream 500 false Scaffold1317: 235557-236056 Capsella grandiflora
Cagra.1317s0069 1.0kb upstream 1.0kb upstream 3331 true Scaffold1317: 236057-239387 Capsella grandiflora
Cagra.1317s0069 1.0kb upstream 1.0kb upstream 1000 false Scaffold1317: 238388-239387 Capsella grandiflora
Cagra.1317s0069 1.0kb downstream 1.0kb downstream 3331 true Scaffold1317: 235057-238387 Capsella grandiflora
Cagra.1317s0069 1.0kb downstream 1.0kb downstream 1000 false Scaffold1317: 235057-236056 Capsella grandiflora
Cagra.1317s0069 2.0kb upstream 2.0kb upstream 4331 true Scaffold1317: 236057-240387 Capsella grandiflora
Cagra.1317s0069 2.0kb upstream 2.0kb upstream 2000 false Scaffold1317: 238388-240387 Capsella grandiflora
Cagra.1317s0069 2.0kb downstream 2.0kb downstream 4331 true Scaffold1317: 234057-238387 Capsella grandiflora
Cagra.1317s0069 2.0kb downstream 2.0kb downstream 2000 false Scaffold1317: 234057-236056 Capsella grandiflora
Cagra.1317s0069 5.0kb upstream 5.0kb upstream 7331 true Scaffold1317: 236057-243387 Capsella grandiflora
Cagra.1317s0069 5.0kb upstream 5.0kb upstream 5000 false Scaffold1317: 238388-243387 Capsella grandiflora
Cagra.1317s0069 5.0kb downstream 5.0kb downstream 7331 true Scaffold1317: 231057-238387 Capsella grandiflora
Cagra.1317s0069 5.0kb downstream 5.0kb downstream 5000 false Scaffold1317: 231057-236056 Capsella grandiflora
Cagra.1317s0069 10.0kb upstream 10.0kb upstream 12331 true Scaffold1317: 236057-248387 Capsella grandiflora
Cagra.1317s0069 10.0kb upstream 10.0kb upstream 10000 false Scaffold1317: 238388-248387 Capsella grandiflora
Cagra.1317s0069 10.0kb downstream 10.0kb downstream 12331 true Scaffold1317: 226057-238387 Capsella grandiflora
Cagra.1317s0069 10.0kb downstream 10.0kb downstream 10000 false Scaffold1317: 226057-236056 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030269 5273 Angiosperm View MSA
122360972 5261 Brassicaceae View MSA
123798075 5264 Brassicales-Malvales View MSA
124295754 5266 SBM View MSA
124148105 5268 Malvidae View MSA
124070691 5270 Rosid View MSA
123752747 5271 Pentapetalae View MSA
122774765 5272 Eudicot View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain