Gene : Cagra.13170s0009 C. grandiflora v1.1
Defline:  (1 of 7) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  9
Name:  ? Cagra.13170s0009 Secondary Identifier:  ? PAC:28906135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13170s0009 0.5kb upstream 0.5kb upstream 1673 true Scaffold13170: 29055-30727 Capsella grandiflora
Cagra.13170s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold13170: 30228-30727 Capsella grandiflora
Cagra.13170s0009 0.5kb downstream 0.5kb downstream 1673 true Scaffold13170: 28555-30227 Capsella grandiflora
Cagra.13170s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold13170: 28555-29054 Capsella grandiflora
Cagra.13170s0009 1.0kb upstream 1.0kb upstream 2006 true Scaffold13170: 29055-31060 Capsella grandiflora
Cagra.13170s0009 1.0kb upstream 1.0kb upstream 833 false Scaffold13170: 30228-31060 Capsella grandiflora
Cagra.13170s0009 1.0kb downstream 1.0kb downstream 2173 true Scaffold13170: 28055-30227 Capsella grandiflora
Cagra.13170s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold13170: 28055-29054 Capsella grandiflora
Cagra.13170s0009 2.0kb upstream 2.0kb upstream 2006 true Scaffold13170: 29055-31060 Capsella grandiflora
Cagra.13170s0009 2.0kb upstream 2.0kb upstream 833 false Scaffold13170: 30228-31060 Capsella grandiflora
Cagra.13170s0009 2.0kb downstream 2.0kb downstream 3173 true Scaffold13170: 27055-30227 Capsella grandiflora
Cagra.13170s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold13170: 27055-29054 Capsella grandiflora
Cagra.13170s0009 5.0kb upstream 5.0kb upstream 2006 true Scaffold13170: 29055-31060 Capsella grandiflora
Cagra.13170s0009 5.0kb upstream 5.0kb upstream 833 false Scaffold13170: 30228-31060 Capsella grandiflora
Cagra.13170s0009 5.0kb downstream 5.0kb downstream 6173 true Scaffold13170: 24055-30227 Capsella grandiflora
Cagra.13170s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold13170: 24055-29054 Capsella grandiflora
Cagra.13170s0009 10.0kb upstream 10.0kb upstream 2006 true Scaffold13170: 29055-31060 Capsella grandiflora
Cagra.13170s0009 10.0kb upstream 10.0kb upstream 833 false Scaffold13170: 30228-31060 Capsella grandiflora
Cagra.13170s0009 10.0kb downstream 10.0kb downstream 11173 true Scaffold13170: 19055-30227 Capsella grandiflora
Cagra.13170s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold13170: 19055-29054 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378248 5261 Brassicaceae View MSA
123829546 5264 Brassicales-Malvales View MSA
124344695 5266 SBM View MSA
124253628 5268 Malvidae View MSA
124062410 5270 Rosid View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain