Gene : Cagra.1365s0116 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31279:SF12 - PHI-1-LIKE PROTEIN Genomic Order:  116
Name:  ? Cagra.1365s0116 Secondary Identifier:  ? PAC:28919249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1365s0116 0.5kb upstream 0.5kb upstream 1644 true Scaffold1365: 398696-400339 Capsella grandiflora
Cagra.1365s0116 0.5kb upstream 0.5kb upstream 500 false Scaffold1365: 398696-399195 Capsella grandiflora
Cagra.1365s0116 0.5kb downstream 0.5kb downstream 1644 true Scaffold1365: 399196-400839 Capsella grandiflora
Cagra.1365s0116 0.5kb downstream 0.5kb downstream 500 false Scaffold1365: 400340-400839 Capsella grandiflora
Cagra.1365s0116 1.0kb upstream 1.0kb upstream 2144 true Scaffold1365: 398196-400339 Capsella grandiflora
Cagra.1365s0116 1.0kb upstream 1.0kb upstream 1000 false Scaffold1365: 398196-399195 Capsella grandiflora
Cagra.1365s0116 1.0kb downstream 1.0kb downstream 2144 true Scaffold1365: 399196-401339 Capsella grandiflora
Cagra.1365s0116 1.0kb downstream 1.0kb downstream 1000 false Scaffold1365: 400340-401339 Capsella grandiflora
Cagra.1365s0116 2.0kb upstream 2.0kb upstream 3144 true Scaffold1365: 397196-400339 Capsella grandiflora
Cagra.1365s0116 2.0kb upstream 2.0kb upstream 2000 false Scaffold1365: 397196-399195 Capsella grandiflora
Cagra.1365s0116 2.0kb downstream 2.0kb downstream 3144 true Scaffold1365: 399196-402339 Capsella grandiflora
Cagra.1365s0116 2.0kb downstream 2.0kb downstream 2000 false Scaffold1365: 400340-402339 Capsella grandiflora
Cagra.1365s0116 5.0kb upstream 5.0kb upstream 6144 true Scaffold1365: 394196-400339 Capsella grandiflora
Cagra.1365s0116 5.0kb upstream 5.0kb upstream 5000 false Scaffold1365: 394196-399195 Capsella grandiflora
Cagra.1365s0116 5.0kb downstream 5.0kb downstream 6144 true Scaffold1365: 399196-405339 Capsella grandiflora
Cagra.1365s0116 5.0kb downstream 5.0kb downstream 5000 false Scaffold1365: 400340-405339 Capsella grandiflora
Cagra.1365s0116 10.0kb upstream 10.0kb upstream 11144 true Scaffold1365: 389196-400339 Capsella grandiflora
Cagra.1365s0116 10.0kb upstream 10.0kb upstream 10000 false Scaffold1365: 389196-399195 Capsella grandiflora
Cagra.1365s0116 10.0kb downstream 10.0kb downstream 11144 true Scaffold1365: 399196-410339 Capsella grandiflora
Cagra.1365s0116 10.0kb downstream 10.0kb downstream 10000 false Scaffold1365: 400340-410339 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791521 5272 Eudicot View MSA
122363792 5261 Brassicaceae View MSA
123798615 5264 Brassicales-Malvales View MSA
124296226 5266 SBM View MSA
124250375 5268 Malvidae View MSA
124070844 5270 Rosid View MSA
123746881 5271 Pentapetalae View MSA
122046838 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain