Gene : Cagra.1361s0024 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31165:SF9 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 7-RELATED Genomic Order:  24
Name:  ? Cagra.1361s0024 Secondary Identifier:  ? PAC:28915565
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0024 0.5kb upstream 0.5kb upstream 1076 true Scaffold1361: 79612-80687 Capsella grandiflora
Cagra.1361s0024 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 80188-80687 Capsella grandiflora
Cagra.1361s0024 0.5kb downstream 0.5kb downstream 1076 true Scaffold1361: 79112-80187 Capsella grandiflora
Cagra.1361s0024 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 79112-79611 Capsella grandiflora
Cagra.1361s0024 1.0kb upstream 1.0kb upstream 1576 true Scaffold1361: 79612-81187 Capsella grandiflora
Cagra.1361s0024 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 80188-81187 Capsella grandiflora
Cagra.1361s0024 1.0kb downstream 1.0kb downstream 1576 true Scaffold1361: 78612-80187 Capsella grandiflora
Cagra.1361s0024 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 78612-79611 Capsella grandiflora
Cagra.1361s0024 2.0kb upstream 2.0kb upstream 2576 true Scaffold1361: 79612-82187 Capsella grandiflora
Cagra.1361s0024 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 80188-82187 Capsella grandiflora
Cagra.1361s0024 2.0kb downstream 2.0kb downstream 2576 true Scaffold1361: 77612-80187 Capsella grandiflora
Cagra.1361s0024 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 77612-79611 Capsella grandiflora
Cagra.1361s0024 5.0kb upstream 5.0kb upstream 5576 true Scaffold1361: 79612-85187 Capsella grandiflora
Cagra.1361s0024 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 80188-85187 Capsella grandiflora
Cagra.1361s0024 5.0kb downstream 5.0kb downstream 5576 true Scaffold1361: 74612-80187 Capsella grandiflora
Cagra.1361s0024 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 74612-79611 Capsella grandiflora
Cagra.1361s0024 10.0kb upstream 10.0kb upstream 10576 true Scaffold1361: 79612-90187 Capsella grandiflora
Cagra.1361s0024 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 80188-90187 Capsella grandiflora
Cagra.1361s0024 10.0kb downstream 10.0kb downstream 10576 true Scaffold1361: 69612-80187 Capsella grandiflora
Cagra.1361s0024 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 69612-79611 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122378552 5261 Brassicaceae View MSA
123836068 5264 Brassicales-Malvales View MSA
124347422 5266 SBM View MSA
124244841 5268 Malvidae View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain