Gene : Cagra.1361s0025 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32444:SF10 - D-MANNOSE BINDING LECTIN PROTEIN WITH APPLE-LIKE CARBOHYDRATE-BINDING DOMAIN Genomic Order:  25
Name:  ? Cagra.1361s0025 Secondary Identifier:  ? PAC:28915582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1361s0025 0.5kb upstream 0.5kb upstream 2055 true Scaffold1361: 81867-83921 Capsella grandiflora
Cagra.1361s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold1361: 83422-83921 Capsella grandiflora
Cagra.1361s0025 0.5kb downstream 0.5kb downstream 2055 true Scaffold1361: 81367-83421 Capsella grandiflora
Cagra.1361s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold1361: 81367-81866 Capsella grandiflora
Cagra.1361s0025 1.0kb upstream 1.0kb upstream 2555 true Scaffold1361: 81867-84421 Capsella grandiflora
Cagra.1361s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold1361: 83422-84421 Capsella grandiflora
Cagra.1361s0025 1.0kb downstream 1.0kb downstream 2555 true Scaffold1361: 80867-83421 Capsella grandiflora
Cagra.1361s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold1361: 80867-81866 Capsella grandiflora
Cagra.1361s0025 2.0kb upstream 2.0kb upstream 3555 true Scaffold1361: 81867-85421 Capsella grandiflora
Cagra.1361s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold1361: 83422-85421 Capsella grandiflora
Cagra.1361s0025 2.0kb downstream 2.0kb downstream 3555 true Scaffold1361: 79867-83421 Capsella grandiflora
Cagra.1361s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold1361: 79867-81866 Capsella grandiflora
Cagra.1361s0025 5.0kb upstream 5.0kb upstream 6555 true Scaffold1361: 81867-88421 Capsella grandiflora
Cagra.1361s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold1361: 83422-88421 Capsella grandiflora
Cagra.1361s0025 5.0kb downstream 5.0kb downstream 6555 true Scaffold1361: 76867-83421 Capsella grandiflora
Cagra.1361s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold1361: 76867-81866 Capsella grandiflora
Cagra.1361s0025 10.0kb upstream 10.0kb upstream 11555 true Scaffold1361: 81867-93421 Capsella grandiflora
Cagra.1361s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold1361: 83422-93421 Capsella grandiflora
Cagra.1361s0025 10.0kb downstream 10.0kb downstream 11555 true Scaffold1361: 71867-83421 Capsella grandiflora
Cagra.1361s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold1361: 71867-81866 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338381 5261 Brassicaceae View MSA
123778961 5264 Brassicales-Malvales View MSA
124277295 5266 SBM View MSA
124132510 5268 Malvidae View MSA
123860803 5270 Rosid View MSA
123446391 5271 Pentapetalae View MSA
122481942 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain