Gene : Cagra.0147s0002 C. grandiflora v1.1
Defline:  (1 of 1) PF15370 - Domain of unknown function (DUF4598) (DUF4598) Genomic Order:  2
Name:  ? Cagra.0147s0002 Secondary Identifier:  ? PAC:28896387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0002 0.5kb upstream 0.5kb upstream 1022 true Scaffold147: 3789-4810 Capsella grandiflora
Cagra.0147s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 4311-4810 Capsella grandiflora
Cagra.0147s0002 0.5kb downstream 0.5kb downstream 1022 true Scaffold147: 3289-4310 Capsella grandiflora
Cagra.0147s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 3289-3788 Capsella grandiflora
Cagra.0147s0002 1.0kb upstream 1.0kb upstream 1522 true Scaffold147: 3789-5310 Capsella grandiflora
Cagra.0147s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 4311-5310 Capsella grandiflora
Cagra.0147s0002 1.0kb downstream 1.0kb downstream 1522 true Scaffold147: 2789-4310 Capsella grandiflora
Cagra.0147s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 2789-3788 Capsella grandiflora
Cagra.0147s0002 2.0kb upstream 2.0kb upstream 2522 true Scaffold147: 3789-6310 Capsella grandiflora
Cagra.0147s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 4311-6310 Capsella grandiflora
Cagra.0147s0002 2.0kb downstream 2.0kb downstream 2522 true Scaffold147: 1789-4310 Capsella grandiflora
Cagra.0147s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 1789-3788 Capsella grandiflora
Cagra.0147s0002 5.0kb upstream 5.0kb upstream 5522 true Scaffold147: 3789-9310 Capsella grandiflora
Cagra.0147s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 4311-9310 Capsella grandiflora
Cagra.0147s0002 5.0kb downstream 5.0kb downstream 4310 true Scaffold147: 1-4310 Capsella grandiflora
Cagra.0147s0002 5.0kb downstream 5.0kb downstream 3788 false Scaffold147: 1-3788 Capsella grandiflora
Cagra.0147s0002 10.0kb upstream 10.0kb upstream 10522 true Scaffold147: 3789-14310 Capsella grandiflora
Cagra.0147s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 4311-14310 Capsella grandiflora
Cagra.0147s0002 10.0kb downstream 10.0kb downstream 4310 true Scaffold147: 1-4310 Capsella grandiflora
Cagra.0147s0002 10.0kb downstream 10.0kb downstream 3788 false Scaffold147: 1-3788 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369026 5261 Brassicaceae View MSA
123828618 5264 Brassicales-Malvales View MSA
124342485 5266 SBM View MSA
124239178 5268 Malvidae View MSA
124050437 5270 Rosid View MSA
123745056 5271 Pentapetalae View MSA
122789352 5272 Eudicot View MSA
122046773 5273 Angiosperm View MSA
121350324 5274 Embryophyte View MSA
123426876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain