Gene : Cagra.0147s0025 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31561:SF20 - 3-KETOACYL-COA SYNTHASE 7 Genomic Order:  25
Name:  ? Cagra.0147s0025 Secondary Identifier:  ? PAC:28896423
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0025 0.5kb upstream 0.5kb upstream 2236 true Scaffold147: 82369-84604 Capsella grandiflora
Cagra.0147s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 82369-82868 Capsella grandiflora
Cagra.0147s0025 0.5kb downstream 0.5kb downstream 2236 true Scaffold147: 82869-85104 Capsella grandiflora
Cagra.0147s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 84605-85104 Capsella grandiflora
Cagra.0147s0025 1.0kb upstream 1.0kb upstream 2736 true Scaffold147: 81869-84604 Capsella grandiflora
Cagra.0147s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 81869-82868 Capsella grandiflora
Cagra.0147s0025 1.0kb downstream 1.0kb downstream 2736 true Scaffold147: 82869-85604 Capsella grandiflora
Cagra.0147s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 84605-85604 Capsella grandiflora
Cagra.0147s0025 2.0kb upstream 2.0kb upstream 3736 true Scaffold147: 80869-84604 Capsella grandiflora
Cagra.0147s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 80869-82868 Capsella grandiflora
Cagra.0147s0025 2.0kb downstream 2.0kb downstream 3736 true Scaffold147: 82869-86604 Capsella grandiflora
Cagra.0147s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 84605-86604 Capsella grandiflora
Cagra.0147s0025 5.0kb upstream 5.0kb upstream 6736 true Scaffold147: 77869-84604 Capsella grandiflora
Cagra.0147s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 77869-82868 Capsella grandiflora
Cagra.0147s0025 5.0kb downstream 5.0kb downstream 6736 true Scaffold147: 82869-89604 Capsella grandiflora
Cagra.0147s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 84605-89604 Capsella grandiflora
Cagra.0147s0025 10.0kb upstream 10.0kb upstream 11736 true Scaffold147: 72869-84604 Capsella grandiflora
Cagra.0147s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 72869-82868 Capsella grandiflora
Cagra.0147s0025 10.0kb downstream 10.0kb downstream 11736 true Scaffold147: 82869-94604 Capsella grandiflora
Cagra.0147s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 84605-94604 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367159 5261 Brassicaceae View MSA
123799305 5264 Brassicales-Malvales View MSA
124341517 5266 SBM View MSA
124246070 5268 Malvidae View MSA
124068402 5270 Rosid View MSA
123736932 5271 Pentapetalae View MSA
122769883 5272 Eudicot View MSA
122042754 5273 Angiosperm View MSA
121310017 5274 Embryophyte View MSA
123347622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain