Gene : Cagra.1508s0082 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33133:SF12 - F28K20.6 PROTEIN-RELATED Genomic Order:  82
Name:  ? Cagra.1508s0082 Secondary Identifier:  ? PAC:28905818
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0082 0.5kb upstream 0.5kb upstream 1746 true Scaffold1508: 336180-337925 Capsella grandiflora
Cagra.1508s0082 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 336180-336679 Capsella grandiflora
Cagra.1508s0082 0.5kb downstream 0.5kb downstream 1746 true Scaffold1508: 336680-338425 Capsella grandiflora
Cagra.1508s0082 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 337926-338425 Capsella grandiflora
Cagra.1508s0082 1.0kb upstream 1.0kb upstream 2246 true Scaffold1508: 335680-337925 Capsella grandiflora
Cagra.1508s0082 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 335680-336679 Capsella grandiflora
Cagra.1508s0082 1.0kb downstream 1.0kb downstream 2246 true Scaffold1508: 336680-338925 Capsella grandiflora
Cagra.1508s0082 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 337926-338925 Capsella grandiflora
Cagra.1508s0082 2.0kb upstream 2.0kb upstream 3246 true Scaffold1508: 334680-337925 Capsella grandiflora
Cagra.1508s0082 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 334680-336679 Capsella grandiflora
Cagra.1508s0082 2.0kb downstream 2.0kb downstream 3246 true Scaffold1508: 336680-339925 Capsella grandiflora
Cagra.1508s0082 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 337926-339925 Capsella grandiflora
Cagra.1508s0082 5.0kb upstream 5.0kb upstream 6246 true Scaffold1508: 331680-337925 Capsella grandiflora
Cagra.1508s0082 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 331680-336679 Capsella grandiflora
Cagra.1508s0082 5.0kb downstream 5.0kb downstream 6246 true Scaffold1508: 336680-342925 Capsella grandiflora
Cagra.1508s0082 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 337926-342925 Capsella grandiflora
Cagra.1508s0082 10.0kb upstream 10.0kb upstream 11246 true Scaffold1508: 326680-337925 Capsella grandiflora
Cagra.1508s0082 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 326680-336679 Capsella grandiflora
Cagra.1508s0082 10.0kb downstream 10.0kb downstream 11246 true Scaffold1508: 336680-347925 Capsella grandiflora
Cagra.1508s0082 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 337926-347925 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379259 5261 Brassicaceae View MSA
123802171 5264 Brassicales-Malvales View MSA
124350918 5266 SBM View MSA
124245716 5268 Malvidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain