Gene : Cagra.1508s0010 C. grandiflora v1.1
Defline:  (1 of 54) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  10
Name:  ? Cagra.1508s0010 Secondary Identifier:  ? PAC:28905750
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1508s0010 0.5kb upstream 0.5kb upstream 2327 true Scaffold1508: 50669-52995 Capsella grandiflora
Cagra.1508s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1508: 50669-51168 Capsella grandiflora
Cagra.1508s0010 0.5kb downstream 0.5kb downstream 2327 true Scaffold1508: 51169-53495 Capsella grandiflora
Cagra.1508s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1508: 52996-53495 Capsella grandiflora
Cagra.1508s0010 1.0kb upstream 1.0kb upstream 2827 true Scaffold1508: 50169-52995 Capsella grandiflora
Cagra.1508s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1508: 50169-51168 Capsella grandiflora
Cagra.1508s0010 1.0kb downstream 1.0kb downstream 2827 true Scaffold1508: 51169-53995 Capsella grandiflora
Cagra.1508s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1508: 52996-53995 Capsella grandiflora
Cagra.1508s0010 2.0kb upstream 2.0kb upstream 3827 true Scaffold1508: 49169-52995 Capsella grandiflora
Cagra.1508s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1508: 49169-51168 Capsella grandiflora
Cagra.1508s0010 2.0kb downstream 2.0kb downstream 3827 true Scaffold1508: 51169-54995 Capsella grandiflora
Cagra.1508s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1508: 52996-54995 Capsella grandiflora
Cagra.1508s0010 5.0kb upstream 5.0kb upstream 6827 true Scaffold1508: 46169-52995 Capsella grandiflora
Cagra.1508s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1508: 46169-51168 Capsella grandiflora
Cagra.1508s0010 5.0kb downstream 5.0kb downstream 6827 true Scaffold1508: 51169-57995 Capsella grandiflora
Cagra.1508s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1508: 52996-57995 Capsella grandiflora
Cagra.1508s0010 10.0kb upstream 10.0kb upstream 11827 true Scaffold1508: 41169-52995 Capsella grandiflora
Cagra.1508s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1508: 41169-51168 Capsella grandiflora
Cagra.1508s0010 10.0kb downstream 10.0kb downstream 11827 true Scaffold1508: 51169-62995 Capsella grandiflora
Cagra.1508s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1508: 52996-62995 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373705 5261 Brassicaceae View MSA
123833353 5264 Brassicales-Malvales View MSA
124338635 5266 SBM View MSA
124239171 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain