Gene : Cagra.14923s0001 C. grandiflora v1.1
Defline:  (1 of 6) 2.5.1.112 - Adenylate dimethylallyltransferase (ADP/ATP-dependent) / Isopentenyltransferase Genomic Order:  1
Name:  ? Cagra.14923s0001 Secondary Identifier:  ? PAC:28901830
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2681 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14923s0001 0.5kb upstream 0.5kb upstream 1463 true Scaffold14923: 348-1810 Capsella grandiflora
Cagra.14923s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold14923: 348-847 Capsella grandiflora
Cagra.14923s0001 0.5kb downstream 0.5kb downstream 976 true Scaffold14923: 848-1823 Capsella grandiflora
Cagra.14923s0001 0.5kb downstream 0.5kb downstream 13 false Scaffold14923: 1811-1823 Capsella grandiflora
Cagra.14923s0001 1.0kb upstream 1.0kb upstream 1810 true Scaffold14923: 1-1810 Capsella grandiflora
Cagra.14923s0001 1.0kb upstream 1.0kb upstream 847 false Scaffold14923: 1-847 Capsella grandiflora
Cagra.14923s0001 1.0kb downstream 1.0kb downstream 976 true Scaffold14923: 848-1823 Capsella grandiflora
Cagra.14923s0001 1.0kb downstream 1.0kb downstream 13 false Scaffold14923: 1811-1823 Capsella grandiflora
Cagra.14923s0001 2.0kb upstream 2.0kb upstream 1810 true Scaffold14923: 1-1810 Capsella grandiflora
Cagra.14923s0001 2.0kb upstream 2.0kb upstream 847 false Scaffold14923: 1-847 Capsella grandiflora
Cagra.14923s0001 2.0kb downstream 2.0kb downstream 976 true Scaffold14923: 848-1823 Capsella grandiflora
Cagra.14923s0001 2.0kb downstream 2.0kb downstream 13 false Scaffold14923: 1811-1823 Capsella grandiflora
Cagra.14923s0001 5.0kb upstream 5.0kb upstream 1810 true Scaffold14923: 1-1810 Capsella grandiflora
Cagra.14923s0001 5.0kb upstream 5.0kb upstream 847 false Scaffold14923: 1-847 Capsella grandiflora
Cagra.14923s0001 5.0kb downstream 5.0kb downstream 976 true Scaffold14923: 848-1823 Capsella grandiflora
Cagra.14923s0001 5.0kb downstream 5.0kb downstream 13 false Scaffold14923: 1811-1823 Capsella grandiflora
Cagra.14923s0001 10.0kb upstream 10.0kb upstream 1810 true Scaffold14923: 1-1810 Capsella grandiflora
Cagra.14923s0001 10.0kb upstream 10.0kb upstream 847 false Scaffold14923: 1-847 Capsella grandiflora
Cagra.14923s0001 10.0kb downstream 10.0kb downstream 976 true Scaffold14923: 848-1823 Capsella grandiflora
Cagra.14923s0001 10.0kb downstream 10.0kb downstream 13 false Scaffold14923: 1811-1823 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364227 5261 Brassicaceae View MSA
123837698 5264 Brassicales-Malvales View MSA
124349222 5266 SBM View MSA
124250835 5268 Malvidae View MSA
124061925 5270 Rosid View MSA
123742682 5271 Pentapetalae View MSA
122792550 5272 Eudicot View MSA
122046326 5273 Angiosperm View MSA
121310589 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain