Gene : Cagra.1562s0004 C. grandiflora v1.1
Defline:  (1 of 40) 3.2.1.21 - Beta-glucosidase / Gentobiase Genomic Order:  4
Name:  ? Cagra.1562s0004 Secondary Identifier:  ? PAC:28904627
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5176 Capsella grandiflora pathologic  
Cgrandiflora PWY-7089 Capsella grandiflora pathologic  
Cgrandiflora PWY-7091 Capsella grandiflora pathologic  
Cgrandiflora PWY-7092 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1562s0004 0.5kb upstream 0.5kb upstream 2021 true Scaffold1562: 11503-13523 Capsella grandiflora
Cagra.1562s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1562: 11503-12002 Capsella grandiflora
Cagra.1562s0004 0.5kb downstream 0.5kb downstream 2021 true Scaffold1562: 12003-14023 Capsella grandiflora
Cagra.1562s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1562: 13524-14023 Capsella grandiflora
Cagra.1562s0004 1.0kb upstream 1.0kb upstream 2521 true Scaffold1562: 11003-13523 Capsella grandiflora
Cagra.1562s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1562: 11003-12002 Capsella grandiflora
Cagra.1562s0004 1.0kb downstream 1.0kb downstream 2521 true Scaffold1562: 12003-14523 Capsella grandiflora
Cagra.1562s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1562: 13524-14523 Capsella grandiflora
Cagra.1562s0004 2.0kb upstream 2.0kb upstream 3521 true Scaffold1562: 10003-13523 Capsella grandiflora
Cagra.1562s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1562: 10003-12002 Capsella grandiflora
Cagra.1562s0004 2.0kb downstream 2.0kb downstream 3521 true Scaffold1562: 12003-15523 Capsella grandiflora
Cagra.1562s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1562: 13524-15523 Capsella grandiflora
Cagra.1562s0004 5.0kb upstream 5.0kb upstream 6521 true Scaffold1562: 7003-13523 Capsella grandiflora
Cagra.1562s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1562: 7003-12002 Capsella grandiflora
Cagra.1562s0004 5.0kb downstream 5.0kb downstream 6521 true Scaffold1562: 12003-18523 Capsella grandiflora
Cagra.1562s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1562: 13524-18523 Capsella grandiflora
Cagra.1562s0004 10.0kb upstream 10.0kb upstream 11521 true Scaffold1562: 2003-13523 Capsella grandiflora
Cagra.1562s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1562: 2003-12002 Capsella grandiflora
Cagra.1562s0004 10.0kb downstream 10.0kb downstream 11521 true Scaffold1562: 12003-23523 Capsella grandiflora
Cagra.1562s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1562: 13524-23523 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380441 5261 Brassicaceae View MSA
123802716 5264 Brassicales-Malvales View MSA
124350500 5266 SBM View MSA
124252389 5268 Malvidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain