Gene : Cagra.0157s0008 C. grandiflora v1.1
Defline:  (1 of 11) PTHR31662:SF1 - A_IG002N01.32 PROTEIN-RELATED Genomic Order:  8
Name:  ? Cagra.0157s0008 Secondary Identifier:  ? PAC:28915965
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0157s0008 0.5kb upstream 0.5kb upstream 1418 true Scaffold157: 22563-23980 Capsella grandiflora
Cagra.0157s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold157: 22563-23062 Capsella grandiflora
Cagra.0157s0008 0.5kb downstream 0.5kb downstream 1418 true Scaffold157: 23063-24480 Capsella grandiflora
Cagra.0157s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold157: 23981-24480 Capsella grandiflora
Cagra.0157s0008 1.0kb upstream 1.0kb upstream 1918 true Scaffold157: 22063-23980 Capsella grandiflora
Cagra.0157s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold157: 22063-23062 Capsella grandiflora
Cagra.0157s0008 1.0kb downstream 1.0kb downstream 1918 true Scaffold157: 23063-24980 Capsella grandiflora
Cagra.0157s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold157: 23981-24980 Capsella grandiflora
Cagra.0157s0008 2.0kb upstream 2.0kb upstream 2918 true Scaffold157: 21063-23980 Capsella grandiflora
Cagra.0157s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold157: 21063-23062 Capsella grandiflora
Cagra.0157s0008 2.0kb downstream 2.0kb downstream 2918 true Scaffold157: 23063-25980 Capsella grandiflora
Cagra.0157s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold157: 23981-25980 Capsella grandiflora
Cagra.0157s0008 5.0kb upstream 5.0kb upstream 5918 true Scaffold157: 18063-23980 Capsella grandiflora
Cagra.0157s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold157: 18063-23062 Capsella grandiflora
Cagra.0157s0008 5.0kb downstream 5.0kb downstream 5918 true Scaffold157: 23063-28980 Capsella grandiflora
Cagra.0157s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold157: 23981-28980 Capsella grandiflora
Cagra.0157s0008 10.0kb upstream 10.0kb upstream 10918 true Scaffold157: 13063-23980 Capsella grandiflora
Cagra.0157s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold157: 13063-23062 Capsella grandiflora
Cagra.0157s0008 10.0kb downstream 10.0kb downstream 10918 true Scaffold157: 23063-33980 Capsella grandiflora
Cagra.0157s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold157: 23981-33980 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338637 5261 Brassicaceae View MSA
123779191 5264 Brassicales-Malvales View MSA
124277521 5266 SBM View MSA
124132713 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain