Gene : Cagra.15490s0002 C. grandiflora v1.1
Defline:  (1 of 4) PTHR32246:SF16 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.15490s0002 Secondary Identifier:  ? PAC:28896327
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15490s0002 0.5kb upstream 0.5kb upstream 1715 true Scaffold15490: 5419-7133 Capsella grandiflora
Cagra.15490s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold15490: 6634-7133 Capsella grandiflora
Cagra.15490s0002 0.5kb downstream 0.5kb downstream 1715 true Scaffold15490: 4919-6633 Capsella grandiflora
Cagra.15490s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold15490: 4919-5418 Capsella grandiflora
Cagra.15490s0002 1.0kb upstream 1.0kb upstream 2010 true Scaffold15490: 5419-7428 Capsella grandiflora
Cagra.15490s0002 1.0kb upstream 1.0kb upstream 795 false Scaffold15490: 6634-7428 Capsella grandiflora
Cagra.15490s0002 1.0kb downstream 1.0kb downstream 2215 true Scaffold15490: 4419-6633 Capsella grandiflora
Cagra.15490s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold15490: 4419-5418 Capsella grandiflora
Cagra.15490s0002 2.0kb upstream 2.0kb upstream 2010 true Scaffold15490: 5419-7428 Capsella grandiflora
Cagra.15490s0002 2.0kb upstream 2.0kb upstream 795 false Scaffold15490: 6634-7428 Capsella grandiflora
Cagra.15490s0002 2.0kb downstream 2.0kb downstream 3215 true Scaffold15490: 3419-6633 Capsella grandiflora
Cagra.15490s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold15490: 3419-5418 Capsella grandiflora
Cagra.15490s0002 5.0kb upstream 5.0kb upstream 2010 true Scaffold15490: 5419-7428 Capsella grandiflora
Cagra.15490s0002 5.0kb upstream 5.0kb upstream 795 false Scaffold15490: 6634-7428 Capsella grandiflora
Cagra.15490s0002 5.0kb downstream 5.0kb downstream 6215 true Scaffold15490: 419-6633 Capsella grandiflora
Cagra.15490s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold15490: 419-5418 Capsella grandiflora
Cagra.15490s0002 10.0kb upstream 10.0kb upstream 2010 true Scaffold15490: 5419-7428 Capsella grandiflora
Cagra.15490s0002 10.0kb upstream 10.0kb upstream 795 false Scaffold15490: 6634-7428 Capsella grandiflora
Cagra.15490s0002 10.0kb downstream 10.0kb downstream 6633 true Scaffold15490: 1-6633 Capsella grandiflora
Cagra.15490s0002 10.0kb downstream 10.0kb downstream 5418 false Scaffold15490: 1-5418 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370566 5261 Brassicaceae View MSA
123837320 5264 Brassicales-Malvales View MSA
124351444 5266 SBM View MSA
124253272 5268 Malvidae View MSA
124060581 5270 Rosid View MSA
123752777 5271 Pentapetalae View MSA
122787694 5272 Eudicot View MSA
122048299 5273 Angiosperm View MSA
121351739 5274 Embryophyte View MSA
123427392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain