Gene : Cagra.1554s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31662:SF6 - DNA-BINDING STOREKEEPER PROTEIN-RELATED TRANSCRIPTIONAL REGULATOR Genomic Order:  2
Name:  ? Cagra.1554s0002 Secondary Identifier:  ? PAC:28895011
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1554s0002 0.5kb upstream 0.5kb upstream 2239 true Scaffold1554: 3977-6215 Capsella grandiflora
Cagra.1554s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1554: 3977-4476 Capsella grandiflora
Cagra.1554s0002 0.5kb downstream 0.5kb downstream 1978 true Scaffold1554: 4477-6454 Capsella grandiflora
Cagra.1554s0002 0.5kb downstream 0.5kb downstream 239 false Scaffold1554: 6216-6454 Capsella grandiflora
Cagra.1554s0002 1.0kb upstream 1.0kb upstream 2739 true Scaffold1554: 3477-6215 Capsella grandiflora
Cagra.1554s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1554: 3477-4476 Capsella grandiflora
Cagra.1554s0002 1.0kb downstream 1.0kb downstream 1978 true Scaffold1554: 4477-6454 Capsella grandiflora
Cagra.1554s0002 1.0kb downstream 1.0kb downstream 239 false Scaffold1554: 6216-6454 Capsella grandiflora
Cagra.1554s0002 2.0kb upstream 2.0kb upstream 3739 true Scaffold1554: 2477-6215 Capsella grandiflora
Cagra.1554s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1554: 2477-4476 Capsella grandiflora
Cagra.1554s0002 2.0kb downstream 2.0kb downstream 1978 true Scaffold1554: 4477-6454 Capsella grandiflora
Cagra.1554s0002 2.0kb downstream 2.0kb downstream 239 false Scaffold1554: 6216-6454 Capsella grandiflora
Cagra.1554s0002 5.0kb upstream 5.0kb upstream 6215 true Scaffold1554: 1-6215 Capsella grandiflora
Cagra.1554s0002 5.0kb upstream 5.0kb upstream 4476 false Scaffold1554: 1-4476 Capsella grandiflora
Cagra.1554s0002 5.0kb downstream 5.0kb downstream 1978 true Scaffold1554: 4477-6454 Capsella grandiflora
Cagra.1554s0002 5.0kb downstream 5.0kb downstream 239 false Scaffold1554: 6216-6454 Capsella grandiflora
Cagra.1554s0002 10.0kb upstream 10.0kb upstream 6215 true Scaffold1554: 1-6215 Capsella grandiflora
Cagra.1554s0002 10.0kb upstream 10.0kb upstream 4476 false Scaffold1554: 1-4476 Capsella grandiflora
Cagra.1554s0002 10.0kb downstream 10.0kb downstream 1978 true Scaffold1554: 4477-6454 Capsella grandiflora
Cagra.1554s0002 10.0kb downstream 10.0kb downstream 239 false Scaffold1554: 6216-6454 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370238 5261 Brassicaceae View MSA
123799921 5264 Brassicales-Malvales View MSA
124297390 5266 SBM View MSA
124243934 5268 Malvidae View MSA
124072235 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain