Gene : Cagra.1561s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF9 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  3
Name:  ? Cagra.1561s0003 Secondary Identifier:  ? PAC:28907461
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1561s0003 0.5kb upstream 0.5kb upstream 1460 true Scaffold1561: 10496-11955 Capsella grandiflora
Cagra.1561s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold1561: 11456-11955 Capsella grandiflora
Cagra.1561s0003 0.5kb downstream 0.5kb downstream 1460 true Scaffold1561: 9996-11455 Capsella grandiflora
Cagra.1561s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold1561: 9996-10495 Capsella grandiflora
Cagra.1561s0003 1.0kb upstream 1.0kb upstream 1960 true Scaffold1561: 10496-12455 Capsella grandiflora
Cagra.1561s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold1561: 11456-12455 Capsella grandiflora
Cagra.1561s0003 1.0kb downstream 1.0kb downstream 1960 true Scaffold1561: 9496-11455 Capsella grandiflora
Cagra.1561s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold1561: 9496-10495 Capsella grandiflora
Cagra.1561s0003 2.0kb upstream 2.0kb upstream 2960 true Scaffold1561: 10496-13455 Capsella grandiflora
Cagra.1561s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold1561: 11456-13455 Capsella grandiflora
Cagra.1561s0003 2.0kb downstream 2.0kb downstream 2960 true Scaffold1561: 8496-11455 Capsella grandiflora
Cagra.1561s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold1561: 8496-10495 Capsella grandiflora
Cagra.1561s0003 5.0kb upstream 5.0kb upstream 5960 true Scaffold1561: 10496-16455 Capsella grandiflora
Cagra.1561s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold1561: 11456-16455 Capsella grandiflora
Cagra.1561s0003 5.0kb downstream 5.0kb downstream 5960 true Scaffold1561: 5496-11455 Capsella grandiflora
Cagra.1561s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold1561: 5496-10495 Capsella grandiflora
Cagra.1561s0003 10.0kb upstream 10.0kb upstream 10960 true Scaffold1561: 10496-21455 Capsella grandiflora
Cagra.1561s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold1561: 11456-21455 Capsella grandiflora
Cagra.1561s0003 10.0kb downstream 10.0kb downstream 10960 true Scaffold1561: 496-11455 Capsella grandiflora
Cagra.1561s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold1561: 496-10495 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362658 5261 Brassicaceae View MSA
123830997 5264 Brassicales-Malvales View MSA
124321704 5266 SBM View MSA
124239400 5268 Malvidae View MSA
124065718 5270 Rosid View MSA
123747007 5271 Pentapetalae View MSA
122792186 5272 Eudicot View MSA
122046110 5273 Angiosperm View MSA
121350750 5274 Embryophyte View MSA
123381874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain