Gene : Cagra.1535s0010 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10024:SF243 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  10
Name:  ? Cagra.1535s0010 Secondary Identifier:  ? PAC:28896729
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1535s0010 0.5kb upstream 0.5kb upstream 2810 true Scaffold1535: 47233-50042 Capsella grandiflora
Cagra.1535s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1535: 49543-50042 Capsella grandiflora
Cagra.1535s0010 0.5kb downstream 0.5kb downstream 2810 true Scaffold1535: 46733-49542 Capsella grandiflora
Cagra.1535s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1535: 46733-47232 Capsella grandiflora
Cagra.1535s0010 1.0kb upstream 1.0kb upstream 3310 true Scaffold1535: 47233-50542 Capsella grandiflora
Cagra.1535s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1535: 49543-50542 Capsella grandiflora
Cagra.1535s0010 1.0kb downstream 1.0kb downstream 3310 true Scaffold1535: 46233-49542 Capsella grandiflora
Cagra.1535s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1535: 46233-47232 Capsella grandiflora
Cagra.1535s0010 2.0kb upstream 2.0kb upstream 4310 true Scaffold1535: 47233-51542 Capsella grandiflora
Cagra.1535s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1535: 49543-51542 Capsella grandiflora
Cagra.1535s0010 2.0kb downstream 2.0kb downstream 4310 true Scaffold1535: 45233-49542 Capsella grandiflora
Cagra.1535s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1535: 45233-47232 Capsella grandiflora
Cagra.1535s0010 5.0kb upstream 5.0kb upstream 7310 true Scaffold1535: 47233-54542 Capsella grandiflora
Cagra.1535s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1535: 49543-54542 Capsella grandiflora
Cagra.1535s0010 5.0kb downstream 5.0kb downstream 7310 true Scaffold1535: 42233-49542 Capsella grandiflora
Cagra.1535s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1535: 42233-47232 Capsella grandiflora
Cagra.1535s0010 10.0kb upstream 10.0kb upstream 12310 true Scaffold1535: 47233-59542 Capsella grandiflora
Cagra.1535s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1535: 49543-59542 Capsella grandiflora
Cagra.1535s0010 10.0kb downstream 10.0kb downstream 12310 true Scaffold1535: 37233-49542 Capsella grandiflora
Cagra.1535s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1535: 37233-47232 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368533 5261 Brassicaceae View MSA
123839886 5264 Brassicales-Malvales View MSA
124340246 5266 SBM View MSA
124251050 5268 Malvidae View MSA
124067885 5270 Rosid View MSA
123751578 5271 Pentapetalae View MSA
122793897 5272 Eudicot View MSA
122046174 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain