Gene : Cagra.1517s0036 C. grandiflora v1.1
Defline:  (1 of 5) PTHR13691 - RIBOSOMAL PROTEIN L2 Genomic Order:  36
Name:  ? Cagra.1517s0036 Secondary Identifier:  ? PAC:28899375
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1517s0036 0.5kb upstream 0.5kb upstream 1205 true Scaffold1517: 102310-103514 Capsella grandiflora
Cagra.1517s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold1517: 102310-102809 Capsella grandiflora
Cagra.1517s0036 0.5kb downstream 0.5kb downstream 1205 true Scaffold1517: 102810-104014 Capsella grandiflora
Cagra.1517s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold1517: 103515-104014 Capsella grandiflora
Cagra.1517s0036 1.0kb upstream 1.0kb upstream 1705 true Scaffold1517: 101810-103514 Capsella grandiflora
Cagra.1517s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold1517: 101810-102809 Capsella grandiflora
Cagra.1517s0036 1.0kb downstream 1.0kb downstream 1705 true Scaffold1517: 102810-104514 Capsella grandiflora
Cagra.1517s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold1517: 103515-104514 Capsella grandiflora
Cagra.1517s0036 2.0kb upstream 2.0kb upstream 2705 true Scaffold1517: 100810-103514 Capsella grandiflora
Cagra.1517s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold1517: 100810-102809 Capsella grandiflora
Cagra.1517s0036 2.0kb downstream 2.0kb downstream 2705 true Scaffold1517: 102810-105514 Capsella grandiflora
Cagra.1517s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold1517: 103515-105514 Capsella grandiflora
Cagra.1517s0036 5.0kb upstream 5.0kb upstream 5705 true Scaffold1517: 97810-103514 Capsella grandiflora
Cagra.1517s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold1517: 97810-102809 Capsella grandiflora
Cagra.1517s0036 5.0kb downstream 5.0kb downstream 5705 true Scaffold1517: 102810-108514 Capsella grandiflora
Cagra.1517s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold1517: 103515-108514 Capsella grandiflora
Cagra.1517s0036 10.0kb upstream 10.0kb upstream 10705 true Scaffold1517: 92810-103514 Capsella grandiflora
Cagra.1517s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold1517: 92810-102809 Capsella grandiflora
Cagra.1517s0036 10.0kb downstream 10.0kb downstream 10705 true Scaffold1517: 102810-113514 Capsella grandiflora
Cagra.1517s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold1517: 103515-113514 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332660 5261 Brassicaceae Singleton cluster - no MSA
123842018 5264 Brassicales-Malvales View MSA
124323187 5266 SBM View MSA
124169360 5268 Malvidae View MSA
124041223 5270 Rosid View MSA
123753732 5271 Pentapetalae View MSA
122797122 5272 Eudicot View MSA
122049375 5273 Angiosperm View MSA
123428909 5275 Viridiplantae View MSA
121350673 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain