Gene : Cagra.1632s0002 C. grandiflora v1.1
Defline:  (1 of 12) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  2
Name:  ? Cagra.1632s0002 Secondary Identifier:  ? PAC:28919456
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1632s0002 0.5kb upstream 0.5kb upstream 1572 true Scaffold1632: 10472-12043 Capsella grandiflora
Cagra.1632s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold1632: 10472-10971 Capsella grandiflora
Cagra.1632s0002 0.5kb downstream 0.5kb downstream 1572 true Scaffold1632: 10972-12543 Capsella grandiflora
Cagra.1632s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold1632: 12044-12543 Capsella grandiflora
Cagra.1632s0002 1.0kb upstream 1.0kb upstream 2072 true Scaffold1632: 9972-12043 Capsella grandiflora
Cagra.1632s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold1632: 9972-10971 Capsella grandiflora
Cagra.1632s0002 1.0kb downstream 1.0kb downstream 2072 true Scaffold1632: 10972-13043 Capsella grandiflora
Cagra.1632s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold1632: 12044-13043 Capsella grandiflora
Cagra.1632s0002 2.0kb upstream 2.0kb upstream 3072 true Scaffold1632: 8972-12043 Capsella grandiflora
Cagra.1632s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold1632: 8972-10971 Capsella grandiflora
Cagra.1632s0002 2.0kb downstream 2.0kb downstream 3072 true Scaffold1632: 10972-14043 Capsella grandiflora
Cagra.1632s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold1632: 12044-14043 Capsella grandiflora
Cagra.1632s0002 5.0kb upstream 5.0kb upstream 6072 true Scaffold1632: 5972-12043 Capsella grandiflora
Cagra.1632s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold1632: 5972-10971 Capsella grandiflora
Cagra.1632s0002 5.0kb downstream 5.0kb downstream 6072 true Scaffold1632: 10972-17043 Capsella grandiflora
Cagra.1632s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold1632: 12044-17043 Capsella grandiflora
Cagra.1632s0002 10.0kb upstream 10.0kb upstream 11072 true Scaffold1632: 972-12043 Capsella grandiflora
Cagra.1632s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold1632: 972-10971 Capsella grandiflora
Cagra.1632s0002 10.0kb downstream 10.0kb downstream 11072 true Scaffold1632: 10972-22043 Capsella grandiflora
Cagra.1632s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold1632: 12044-22043 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373403 5261 Brassicaceae View MSA
123837774 5264 Brassicales-Malvales View MSA
124340488 5266 SBM View MSA
124252626 5268 Malvidae View MSA
124068431 5270 Rosid View MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain