Gene : Cagra.1597s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  6
Name:  ? Cagra.1597s0006 Secondary Identifier:  ? PAC:28906985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1597s0006 0.5kb upstream 0.5kb upstream 1241 true Scaffold1597: 23437-24677 Capsella grandiflora
Cagra.1597s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1597: 24178-24677 Capsella grandiflora
Cagra.1597s0006 0.5kb downstream 0.5kb downstream 1241 true Scaffold1597: 22937-24177 Capsella grandiflora
Cagra.1597s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1597: 22937-23436 Capsella grandiflora
Cagra.1597s0006 1.0kb upstream 1.0kb upstream 1741 true Scaffold1597: 23437-25177 Capsella grandiflora
Cagra.1597s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1597: 24178-25177 Capsella grandiflora
Cagra.1597s0006 1.0kb downstream 1.0kb downstream 1741 true Scaffold1597: 22437-24177 Capsella grandiflora
Cagra.1597s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1597: 22437-23436 Capsella grandiflora
Cagra.1597s0006 2.0kb upstream 2.0kb upstream 2741 true Scaffold1597: 23437-26177 Capsella grandiflora
Cagra.1597s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1597: 24178-26177 Capsella grandiflora
Cagra.1597s0006 2.0kb downstream 2.0kb downstream 2741 true Scaffold1597: 21437-24177 Capsella grandiflora
Cagra.1597s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1597: 21437-23436 Capsella grandiflora
Cagra.1597s0006 5.0kb upstream 5.0kb upstream 5741 true Scaffold1597: 23437-29177 Capsella grandiflora
Cagra.1597s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1597: 24178-29177 Capsella grandiflora
Cagra.1597s0006 5.0kb downstream 5.0kb downstream 5741 true Scaffold1597: 18437-24177 Capsella grandiflora
Cagra.1597s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1597: 18437-23436 Capsella grandiflora
Cagra.1597s0006 10.0kb upstream 10.0kb upstream 10741 true Scaffold1597: 23437-34177 Capsella grandiflora
Cagra.1597s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1597: 24178-34177 Capsella grandiflora
Cagra.1597s0006 10.0kb downstream 10.0kb downstream 10741 true Scaffold1597: 13437-24177 Capsella grandiflora
Cagra.1597s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1597: 13437-23436 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375976 5261 Brassicaceae View MSA
123830125 5264 Brassicales-Malvales View MSA
124342593 5266 SBM View MSA
124243202 5268 Malvidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain