Gene : Cagra.1670s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33512:SF2 - F16P17.15 Genomic Order:  4
Name:  ? Cagra.1670s0004 Secondary Identifier:  ? PAC:28894668
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1670s0004 0.5kb upstream 0.5kb upstream 1538 true Scaffold1670: 15037-16574 Capsella grandiflora
Cagra.1670s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold1670: 16075-16574 Capsella grandiflora
Cagra.1670s0004 0.5kb downstream 0.5kb downstream 1538 true Scaffold1670: 14537-16074 Capsella grandiflora
Cagra.1670s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold1670: 14537-15036 Capsella grandiflora
Cagra.1670s0004 1.0kb upstream 1.0kb upstream 2038 true Scaffold1670: 15037-17074 Capsella grandiflora
Cagra.1670s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold1670: 16075-17074 Capsella grandiflora
Cagra.1670s0004 1.0kb downstream 1.0kb downstream 2038 true Scaffold1670: 14037-16074 Capsella grandiflora
Cagra.1670s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold1670: 14037-15036 Capsella grandiflora
Cagra.1670s0004 2.0kb upstream 2.0kb upstream 3038 true Scaffold1670: 15037-18074 Capsella grandiflora
Cagra.1670s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold1670: 16075-18074 Capsella grandiflora
Cagra.1670s0004 2.0kb downstream 2.0kb downstream 3038 true Scaffold1670: 13037-16074 Capsella grandiflora
Cagra.1670s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold1670: 13037-15036 Capsella grandiflora
Cagra.1670s0004 5.0kb upstream 5.0kb upstream 6038 true Scaffold1670: 15037-21074 Capsella grandiflora
Cagra.1670s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold1670: 16075-21074 Capsella grandiflora
Cagra.1670s0004 5.0kb downstream 5.0kb downstream 6038 true Scaffold1670: 10037-16074 Capsella grandiflora
Cagra.1670s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold1670: 10037-15036 Capsella grandiflora
Cagra.1670s0004 10.0kb upstream 10.0kb upstream 11038 true Scaffold1670: 15037-26074 Capsella grandiflora
Cagra.1670s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold1670: 16075-26074 Capsella grandiflora
Cagra.1670s0004 10.0kb downstream 10.0kb downstream 11038 true Scaffold1670: 5037-16074 Capsella grandiflora
Cagra.1670s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold1670: 5037-15036 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370158 5261 Brassicaceae View MSA
123799911 5264 Brassicales-Malvales View MSA
124347177 5266 SBM View MSA
124244151 5268 Malvidae View MSA
124063099 5270 Rosid View MSA
123739711 5271 Pentapetalae View MSA
122787000 5272 Eudicot View MSA
122049510 5273 Angiosperm View MSA
121311447 5274 Embryophyte View MSA
123348742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain