Gene : Cagra.16435s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31696:SF4 - EXPRESSED PROTEIN Genomic Order:  2
Name:  ? Cagra.16435s0002 Secondary Identifier:  ? PAC:28912468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16435s0002 0.5kb upstream 0.5kb upstream 1277 true Scaffold16435: 1584-2860 Capsella grandiflora
Cagra.16435s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold16435: 1584-2083 Capsella grandiflora
Cagra.16435s0002 0.5kb downstream 0.5kb downstream 1277 true Scaffold16435: 2084-3360 Capsella grandiflora
Cagra.16435s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold16435: 2861-3360 Capsella grandiflora
Cagra.16435s0002 1.0kb upstream 1.0kb upstream 1777 true Scaffold16435: 1084-2860 Capsella grandiflora
Cagra.16435s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold16435: 1084-2083 Capsella grandiflora
Cagra.16435s0002 1.0kb downstream 1.0kb downstream 1777 true Scaffold16435: 2084-3860 Capsella grandiflora
Cagra.16435s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold16435: 2861-3860 Capsella grandiflora
Cagra.16435s0002 2.0kb upstream 2.0kb upstream 2777 true Scaffold16435: 84-2860 Capsella grandiflora
Cagra.16435s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold16435: 84-2083 Capsella grandiflora
Cagra.16435s0002 2.0kb downstream 2.0kb downstream 2777 true Scaffold16435: 2084-4860 Capsella grandiflora
Cagra.16435s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold16435: 2861-4860 Capsella grandiflora
Cagra.16435s0002 5.0kb upstream 5.0kb upstream 2860 true Scaffold16435: 1-2860 Capsella grandiflora
Cagra.16435s0002 5.0kb upstream 5.0kb upstream 2083 false Scaffold16435: 1-2083 Capsella grandiflora
Cagra.16435s0002 5.0kb downstream 5.0kb downstream 5777 true Scaffold16435: 2084-7860 Capsella grandiflora
Cagra.16435s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold16435: 2861-7860 Capsella grandiflora
Cagra.16435s0002 10.0kb upstream 10.0kb upstream 2860 true Scaffold16435: 1-2860 Capsella grandiflora
Cagra.16435s0002 10.0kb upstream 10.0kb upstream 2083 false Scaffold16435: 1-2083 Capsella grandiflora
Cagra.16435s0002 10.0kb downstream 10.0kb downstream 10777 true Scaffold16435: 2084-12860 Capsella grandiflora
Cagra.16435s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold16435: 2861-12860 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367214 5261 Brassicaceae View MSA
123827559 5264 Brassicales-Malvales View MSA
124341414 5266 SBM View MSA
124243407 5268 Malvidae View MSA
124073904 5270 Rosid View MSA
123746420 5271 Pentapetalae View MSA
122793418 5272 Eudicot View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain