Gene : Cagra.1671s0306 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10168:SF57 - GLUTAREDOXIN-C13-RELATED Genomic Order:  306
Name:  ? Cagra.1671s0306 Secondary Identifier:  ? PAC:28914024
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0306 0.5kb upstream 0.5kb upstream 1004 true Scaffold1671: 1119377-1120380 Capsella grandiflora
Cagra.1671s0306 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1119377-1119876 Capsella grandiflora
Cagra.1671s0306 0.5kb downstream 0.5kb downstream 1004 true Scaffold1671: 1119877-1120880 Capsella grandiflora
Cagra.1671s0306 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1120381-1120880 Capsella grandiflora
Cagra.1671s0306 1.0kb upstream 1.0kb upstream 1504 true Scaffold1671: 1118877-1120380 Capsella grandiflora
Cagra.1671s0306 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1118877-1119876 Capsella grandiflora
Cagra.1671s0306 1.0kb downstream 1.0kb downstream 1504 true Scaffold1671: 1119877-1121380 Capsella grandiflora
Cagra.1671s0306 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1120381-1121380 Capsella grandiflora
Cagra.1671s0306 2.0kb upstream 2.0kb upstream 2504 true Scaffold1671: 1117877-1120380 Capsella grandiflora
Cagra.1671s0306 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1117877-1119876 Capsella grandiflora
Cagra.1671s0306 2.0kb downstream 2.0kb downstream 2504 true Scaffold1671: 1119877-1122380 Capsella grandiflora
Cagra.1671s0306 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1120381-1122380 Capsella grandiflora
Cagra.1671s0306 5.0kb upstream 5.0kb upstream 5504 true Scaffold1671: 1114877-1120380 Capsella grandiflora
Cagra.1671s0306 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1114877-1119876 Capsella grandiflora
Cagra.1671s0306 5.0kb downstream 5.0kb downstream 5504 true Scaffold1671: 1119877-1125380 Capsella grandiflora
Cagra.1671s0306 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1120381-1125380 Capsella grandiflora
Cagra.1671s0306 10.0kb upstream 10.0kb upstream 10504 true Scaffold1671: 1109877-1120380 Capsella grandiflora
Cagra.1671s0306 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1109877-1119876 Capsella grandiflora
Cagra.1671s0306 10.0kb downstream 10.0kb downstream 10504 true Scaffold1671: 1119877-1130380 Capsella grandiflora
Cagra.1671s0306 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1120381-1130380 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122367538 5261 Brassicaceae View MSA
123839290 5264 Brassicales-Malvales View MSA
124342010 5266 SBM View MSA
124253588 5268 Malvidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain