Gene : Cagra.1671s0348 C. grandiflora v1.1
Defline:  (1 of 11) PTHR11926:SF242 - UDP-GLYCOSYLTRANSFERASE 71B2-RELATED Genomic Order:  348
Name:  ? Cagra.1671s0348 Secondary Identifier:  ? PAC:28914293
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7186 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0348 0.5kb upstream 0.5kb upstream 1931 true Scaffold1671: 1250125-1252055 Capsella grandiflora
Cagra.1671s0348 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1251556-1252055 Capsella grandiflora
Cagra.1671s0348 0.5kb downstream 0.5kb downstream 1931 true Scaffold1671: 1249625-1251555 Capsella grandiflora
Cagra.1671s0348 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1249625-1250124 Capsella grandiflora
Cagra.1671s0348 1.0kb upstream 1.0kb upstream 2431 true Scaffold1671: 1250125-1252555 Capsella grandiflora
Cagra.1671s0348 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1251556-1252555 Capsella grandiflora
Cagra.1671s0348 1.0kb downstream 1.0kb downstream 2431 true Scaffold1671: 1249125-1251555 Capsella grandiflora
Cagra.1671s0348 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1249125-1250124 Capsella grandiflora
Cagra.1671s0348 2.0kb upstream 2.0kb upstream 3431 true Scaffold1671: 1250125-1253555 Capsella grandiflora
Cagra.1671s0348 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1251556-1253555 Capsella grandiflora
Cagra.1671s0348 2.0kb downstream 2.0kb downstream 3431 true Scaffold1671: 1248125-1251555 Capsella grandiflora
Cagra.1671s0348 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1248125-1250124 Capsella grandiflora
Cagra.1671s0348 5.0kb upstream 5.0kb upstream 6431 true Scaffold1671: 1250125-1256555 Capsella grandiflora
Cagra.1671s0348 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1251556-1256555 Capsella grandiflora
Cagra.1671s0348 5.0kb downstream 5.0kb downstream 6431 true Scaffold1671: 1245125-1251555 Capsella grandiflora
Cagra.1671s0348 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1245125-1250124 Capsella grandiflora
Cagra.1671s0348 10.0kb upstream 10.0kb upstream 11431 true Scaffold1671: 1250125-1261555 Capsella grandiflora
Cagra.1671s0348 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1251556-1261555 Capsella grandiflora
Cagra.1671s0348 10.0kb downstream 10.0kb downstream 11431 true Scaffold1671: 1240125-1251555 Capsella grandiflora
Cagra.1671s0348 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1240125-1250124 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361392 5261 Brassicaceae View MSA
123840802 5264 Brassicales-Malvales View MSA
124349707 5266 SBM View MSA
124247034 5268 Malvidae View MSA
124067865 5270 Rosid View MSA
123749045 5271 Pentapetalae View MSA
122796791 5272 Eudicot View MSA
122049066 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain