Gene : Cagra.1671s0352 C. grandiflora v1.1
Defline:  (1 of 2) KOG2934 - Uncharacterized conserved protein, contains Josephin domain Genomic Order:  352
Name:  ? Cagra.1671s0352 Secondary Identifier:  ? PAC:28914291
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1671s0352 0.5kb upstream 0.5kb upstream 890 true Scaffold1671: 1267252-1268141 Capsella grandiflora
Cagra.1671s0352 0.5kb upstream 0.5kb upstream 500 false Scaffold1671: 1267642-1268141 Capsella grandiflora
Cagra.1671s0352 0.5kb downstream 0.5kb downstream 890 true Scaffold1671: 1266752-1267641 Capsella grandiflora
Cagra.1671s0352 0.5kb downstream 0.5kb downstream 500 false Scaffold1671: 1266752-1267251 Capsella grandiflora
Cagra.1671s0352 1.0kb upstream 1.0kb upstream 1390 true Scaffold1671: 1267252-1268641 Capsella grandiflora
Cagra.1671s0352 1.0kb upstream 1.0kb upstream 1000 false Scaffold1671: 1267642-1268641 Capsella grandiflora
Cagra.1671s0352 1.0kb downstream 1.0kb downstream 1390 true Scaffold1671: 1266252-1267641 Capsella grandiflora
Cagra.1671s0352 1.0kb downstream 1.0kb downstream 1000 false Scaffold1671: 1266252-1267251 Capsella grandiflora
Cagra.1671s0352 2.0kb upstream 2.0kb upstream 2390 true Scaffold1671: 1267252-1269641 Capsella grandiflora
Cagra.1671s0352 2.0kb upstream 2.0kb upstream 2000 false Scaffold1671: 1267642-1269641 Capsella grandiflora
Cagra.1671s0352 2.0kb downstream 2.0kb downstream 2390 true Scaffold1671: 1265252-1267641 Capsella grandiflora
Cagra.1671s0352 2.0kb downstream 2.0kb downstream 2000 false Scaffold1671: 1265252-1267251 Capsella grandiflora
Cagra.1671s0352 5.0kb upstream 5.0kb upstream 5390 true Scaffold1671: 1267252-1272641 Capsella grandiflora
Cagra.1671s0352 5.0kb upstream 5.0kb upstream 5000 false Scaffold1671: 1267642-1272641 Capsella grandiflora
Cagra.1671s0352 5.0kb downstream 5.0kb downstream 5390 true Scaffold1671: 1262252-1267641 Capsella grandiflora
Cagra.1671s0352 5.0kb downstream 5.0kb downstream 5000 false Scaffold1671: 1262252-1267251 Capsella grandiflora
Cagra.1671s0352 10.0kb upstream 10.0kb upstream 10390 true Scaffold1671: 1267252-1277641 Capsella grandiflora
Cagra.1671s0352 10.0kb upstream 10.0kb upstream 10000 false Scaffold1671: 1267642-1277641 Capsella grandiflora
Cagra.1671s0352 10.0kb downstream 10.0kb downstream 10390 true Scaffold1671: 1257252-1267641 Capsella grandiflora
Cagra.1671s0352 10.0kb downstream 10.0kb downstream 10000 false Scaffold1671: 1257252-1267251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366393 5261 Brassicaceae View MSA
123836009 5264 Brassicales-Malvales View MSA
124349973 5266 SBM View MSA
124249096 5268 Malvidae View MSA
124062802 5270 Rosid View MSA
123741869 5271 Pentapetalae View MSA
122770150 5272 Eudicot View MSA
122050114 5273 Angiosperm View MSA
121311748 5274 Embryophyte View MSA
123349004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain