Gene : Cagra.1735s0006 C. grandiflora v1.1
Defline:  (1 of 17) PF14111//PF14392 - Domain of unknown function (DUF4283) (DUF4283) // Zinc knuckle (zf-CCHC_4) Genomic Order:  6
Name:  ? Cagra.1735s0006 Secondary Identifier:  ? PAC:28908166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1735s0006 0.5kb upstream 0.5kb upstream 1694 true Scaffold1735: 15082-16775 Capsella grandiflora
Cagra.1735s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold1735: 15082-15581 Capsella grandiflora
Cagra.1735s0006 0.5kb downstream 0.5kb downstream 1694 true Scaffold1735: 15582-17275 Capsella grandiflora
Cagra.1735s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold1735: 16776-17275 Capsella grandiflora
Cagra.1735s0006 1.0kb upstream 1.0kb upstream 2194 true Scaffold1735: 14582-16775 Capsella grandiflora
Cagra.1735s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold1735: 14582-15581 Capsella grandiflora
Cagra.1735s0006 1.0kb downstream 1.0kb downstream 2194 true Scaffold1735: 15582-17775 Capsella grandiflora
Cagra.1735s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold1735: 16776-17775 Capsella grandiflora
Cagra.1735s0006 2.0kb upstream 2.0kb upstream 3194 true Scaffold1735: 13582-16775 Capsella grandiflora
Cagra.1735s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold1735: 13582-15581 Capsella grandiflora
Cagra.1735s0006 2.0kb downstream 2.0kb downstream 3194 true Scaffold1735: 15582-18775 Capsella grandiflora
Cagra.1735s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold1735: 16776-18775 Capsella grandiflora
Cagra.1735s0006 5.0kb upstream 5.0kb upstream 6194 true Scaffold1735: 10582-16775 Capsella grandiflora
Cagra.1735s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold1735: 10582-15581 Capsella grandiflora
Cagra.1735s0006 5.0kb downstream 5.0kb downstream 6194 true Scaffold1735: 15582-21775 Capsella grandiflora
Cagra.1735s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold1735: 16776-21775 Capsella grandiflora
Cagra.1735s0006 10.0kb upstream 10.0kb upstream 11194 true Scaffold1735: 5582-16775 Capsella grandiflora
Cagra.1735s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold1735: 5582-15581 Capsella grandiflora
Cagra.1735s0006 10.0kb downstream 10.0kb downstream 11194 true Scaffold1735: 15582-26775 Capsella grandiflora
Cagra.1735s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold1735: 16776-26775 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379755 5261 Brassicaceae View MSA
123840396 5264 Brassicales-Malvales View MSA
124322713 5266 SBM View MSA
124254241 5268 Malvidae View MSA
124051495 5270 Rosid View MSA
123753554 5271 Pentapetalae View MSA
122797941 5272 Eudicot View MSA
122051690 5273 Angiosperm View MSA
121351675 5274 Embryophyte View MSA
123428354 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain