Gene : Cagra.1742s0030 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10293:SF37 - MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC Genomic Order:  30
Name:  ? Cagra.1742s0030 Secondary Identifier:  ? PAC:28910564
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1742s0030 0.5kb upstream 0.5kb upstream 1287 true Scaffold1742: 126823-128109 Capsella grandiflora
Cagra.1742s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold1742: 126823-127322 Capsella grandiflora
Cagra.1742s0030 0.5kb downstream 0.5kb downstream 1287 true Scaffold1742: 127323-128609 Capsella grandiflora
Cagra.1742s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold1742: 128110-128609 Capsella grandiflora
Cagra.1742s0030 1.0kb upstream 1.0kb upstream 1787 true Scaffold1742: 126323-128109 Capsella grandiflora
Cagra.1742s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold1742: 126323-127322 Capsella grandiflora
Cagra.1742s0030 1.0kb downstream 1.0kb downstream 1787 true Scaffold1742: 127323-129109 Capsella grandiflora
Cagra.1742s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold1742: 128110-129109 Capsella grandiflora
Cagra.1742s0030 2.0kb upstream 2.0kb upstream 2787 true Scaffold1742: 125323-128109 Capsella grandiflora
Cagra.1742s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold1742: 125323-127322 Capsella grandiflora
Cagra.1742s0030 2.0kb downstream 2.0kb downstream 2787 true Scaffold1742: 127323-130109 Capsella grandiflora
Cagra.1742s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold1742: 128110-130109 Capsella grandiflora
Cagra.1742s0030 5.0kb upstream 5.0kb upstream 5787 true Scaffold1742: 122323-128109 Capsella grandiflora
Cagra.1742s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold1742: 122323-127322 Capsella grandiflora
Cagra.1742s0030 5.0kb downstream 5.0kb downstream 5787 true Scaffold1742: 127323-133109 Capsella grandiflora
Cagra.1742s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold1742: 128110-133109 Capsella grandiflora
Cagra.1742s0030 10.0kb upstream 10.0kb upstream 10787 true Scaffold1742: 117323-128109 Capsella grandiflora
Cagra.1742s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold1742: 117323-127322 Capsella grandiflora
Cagra.1742s0030 10.0kb downstream 10.0kb downstream 10787 true Scaffold1742: 127323-138109 Capsella grandiflora
Cagra.1742s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold1742: 128110-138109 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362021 5261 Brassicaceae View MSA
123831038 5264 Brassicales-Malvales View MSA
124350033 5266 SBM View MSA
124242489 5268 Malvidae View MSA
124074597 5270 Rosid View MSA
123743063 5271 Pentapetalae View MSA
122787324 5272 Eudicot View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain