Gene : Cagra.1725s0099 C. grandiflora v1.1
Defline:  (1 of 33) PF05678 - VQ motif (VQ) Genomic Order:  99
Name:  ? Cagra.1725s0099 Secondary Identifier:  ? PAC:28896142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1725s0099 0.5kb upstream 0.5kb upstream 1317 true Scaffold1725: 375026-376342 Capsella grandiflora
Cagra.1725s0099 0.5kb upstream 0.5kb upstream 500 false Scaffold1725: 375026-375525 Capsella grandiflora
Cagra.1725s0099 0.5kb downstream 0.5kb downstream 1317 true Scaffold1725: 375526-376842 Capsella grandiflora
Cagra.1725s0099 0.5kb downstream 0.5kb downstream 500 false Scaffold1725: 376343-376842 Capsella grandiflora
Cagra.1725s0099 1.0kb upstream 1.0kb upstream 1817 true Scaffold1725: 374526-376342 Capsella grandiflora
Cagra.1725s0099 1.0kb upstream 1.0kb upstream 1000 false Scaffold1725: 374526-375525 Capsella grandiflora
Cagra.1725s0099 1.0kb downstream 1.0kb downstream 1817 true Scaffold1725: 375526-377342 Capsella grandiflora
Cagra.1725s0099 1.0kb downstream 1.0kb downstream 1000 false Scaffold1725: 376343-377342 Capsella grandiflora
Cagra.1725s0099 2.0kb upstream 2.0kb upstream 2817 true Scaffold1725: 373526-376342 Capsella grandiflora
Cagra.1725s0099 2.0kb upstream 2.0kb upstream 2000 false Scaffold1725: 373526-375525 Capsella grandiflora
Cagra.1725s0099 2.0kb downstream 2.0kb downstream 2817 true Scaffold1725: 375526-378342 Capsella grandiflora
Cagra.1725s0099 2.0kb downstream 2.0kb downstream 2000 false Scaffold1725: 376343-378342 Capsella grandiflora
Cagra.1725s0099 5.0kb upstream 5.0kb upstream 5817 true Scaffold1725: 370526-376342 Capsella grandiflora
Cagra.1725s0099 5.0kb upstream 5.0kb upstream 5000 false Scaffold1725: 370526-375525 Capsella grandiflora
Cagra.1725s0099 5.0kb downstream 5.0kb downstream 5817 true Scaffold1725: 375526-381342 Capsella grandiflora
Cagra.1725s0099 5.0kb downstream 5.0kb downstream 5000 false Scaffold1725: 376343-381342 Capsella grandiflora
Cagra.1725s0099 10.0kb upstream 10.0kb upstream 10817 true Scaffold1725: 365526-376342 Capsella grandiflora
Cagra.1725s0099 10.0kb upstream 10.0kb upstream 10000 false Scaffold1725: 365526-375525 Capsella grandiflora
Cagra.1725s0099 10.0kb downstream 10.0kb downstream 10817 true Scaffold1725: 375526-386342 Capsella grandiflora
Cagra.1725s0099 10.0kb downstream 10.0kb downstream 10000 false Scaffold1725: 376343-386342 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381558 5261 Brassicaceae View MSA
123828688 5264 Brassicales-Malvales View MSA
124343024 5266 SBM View MSA
124247497 5268 Malvidae View MSA
124071796 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain