Gene : Cagra.17128s0001 C. grandiflora v1.1
Defline:  (1 of 68) PTHR32212:SF112 - FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.17128s0001 Secondary Identifier:  ? PAC:28910390
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17128s0001 0.5kb upstream 0.5kb upstream 824 true Scaffold17128: 753-1576 Capsella grandiflora
Cagra.17128s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold17128: 753-1252 Capsella grandiflora
Cagra.17128s0001 0.5kb downstream 0.5kb downstream 824 true Scaffold17128: 1253-2076 Capsella grandiflora
Cagra.17128s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold17128: 1577-2076 Capsella grandiflora
Cagra.17128s0001 1.0kb upstream 1.0kb upstream 1324 true Scaffold17128: 253-1576 Capsella grandiflora
Cagra.17128s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold17128: 253-1252 Capsella grandiflora
Cagra.17128s0001 1.0kb downstream 1.0kb downstream 952 true Scaffold17128: 1253-2204 Capsella grandiflora
Cagra.17128s0001 1.0kb downstream 1.0kb downstream 628 false Scaffold17128: 1577-2204 Capsella grandiflora
Cagra.17128s0001 2.0kb upstream 2.0kb upstream 1576 true Scaffold17128: 1-1576 Capsella grandiflora
Cagra.17128s0001 2.0kb upstream 2.0kb upstream 1252 false Scaffold17128: 1-1252 Capsella grandiflora
Cagra.17128s0001 2.0kb downstream 2.0kb downstream 952 true Scaffold17128: 1253-2204 Capsella grandiflora
Cagra.17128s0001 2.0kb downstream 2.0kb downstream 628 false Scaffold17128: 1577-2204 Capsella grandiflora
Cagra.17128s0001 5.0kb upstream 5.0kb upstream 1576 true Scaffold17128: 1-1576 Capsella grandiflora
Cagra.17128s0001 5.0kb upstream 5.0kb upstream 1252 false Scaffold17128: 1-1252 Capsella grandiflora
Cagra.17128s0001 5.0kb downstream 5.0kb downstream 952 true Scaffold17128: 1253-2204 Capsella grandiflora
Cagra.17128s0001 5.0kb downstream 5.0kb downstream 628 false Scaffold17128: 1577-2204 Capsella grandiflora
Cagra.17128s0001 10.0kb upstream 10.0kb upstream 1576 true Scaffold17128: 1-1576 Capsella grandiflora
Cagra.17128s0001 10.0kb upstream 10.0kb upstream 1252 false Scaffold17128: 1-1252 Capsella grandiflora
Cagra.17128s0001 10.0kb downstream 10.0kb downstream 952 true Scaffold17128: 1253-2204 Capsella grandiflora
Cagra.17128s0001 10.0kb downstream 10.0kb downstream 628 false Scaffold17128: 1577-2204 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496196 5273 Angiosperm Singleton cluster - no MSA
122332832 5261 Brassicaceae Singleton cluster - no MSA
123773858 5264 Brassicales-Malvales Singleton cluster - no MSA
124272322 5266 SBM Singleton cluster - no MSA
124128162 5268 Malvidae Singleton cluster - no MSA
123856920 5270 Rosid Singleton cluster - no MSA
123442794 5271 Pentapetalae Singleton cluster - no MSA
122478366 5272 Eudicot Singleton cluster - no MSA
120769557 5274 Embryophyte Singleton cluster - no MSA
122811925 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain