Gene : Cagra.1718s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Genomic Order:  8
Name:  ? Cagra.1718s0008 Secondary Identifier:  ? PAC:28896643
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1718s0008 0.5kb upstream 0.5kb upstream 1355 true Scaffold1718: 24600-25954 Capsella grandiflora
Cagra.1718s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1718: 24600-25099 Capsella grandiflora
Cagra.1718s0008 0.5kb downstream 0.5kb downstream 1355 true Scaffold1718: 25100-26454 Capsella grandiflora
Cagra.1718s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1718: 25955-26454 Capsella grandiflora
Cagra.1718s0008 1.0kb upstream 1.0kb upstream 1855 true Scaffold1718: 24100-25954 Capsella grandiflora
Cagra.1718s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1718: 24100-25099 Capsella grandiflora
Cagra.1718s0008 1.0kb downstream 1.0kb downstream 1855 true Scaffold1718: 25100-26954 Capsella grandiflora
Cagra.1718s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1718: 25955-26954 Capsella grandiflora
Cagra.1718s0008 2.0kb upstream 2.0kb upstream 2855 true Scaffold1718: 23100-25954 Capsella grandiflora
Cagra.1718s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1718: 23100-25099 Capsella grandiflora
Cagra.1718s0008 2.0kb downstream 2.0kb downstream 2855 true Scaffold1718: 25100-27954 Capsella grandiflora
Cagra.1718s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1718: 25955-27954 Capsella grandiflora
Cagra.1718s0008 5.0kb upstream 5.0kb upstream 5855 true Scaffold1718: 20100-25954 Capsella grandiflora
Cagra.1718s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1718: 20100-25099 Capsella grandiflora
Cagra.1718s0008 5.0kb downstream 5.0kb downstream 5855 true Scaffold1718: 25100-30954 Capsella grandiflora
Cagra.1718s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1718: 25955-30954 Capsella grandiflora
Cagra.1718s0008 10.0kb upstream 10.0kb upstream 10855 true Scaffold1718: 15100-25954 Capsella grandiflora
Cagra.1718s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1718: 15100-25099 Capsella grandiflora
Cagra.1718s0008 10.0kb downstream 10.0kb downstream 10855 true Scaffold1718: 25100-35954 Capsella grandiflora
Cagra.1718s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1718: 25955-35954 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370658 5261 Brassicaceae View MSA
123836211 5264 Brassicales-Malvales View MSA
124346408 5266 SBM View MSA
124251850 5268 Malvidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain